Gene RoseRS_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4444 
Symbol 
ID5211429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5567971 
End bp5568975 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID640598023 
Producthypothetical protein 
Protein accessionYP_001278726 
Protein GI148658521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0323466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGA CTATTCCGGC GACCGCGCCG GAGGTGGACC CGACCAAACC GCCGCCGGCG 
GAGTATCTGC CGGACTATGA CCAGTTCGTG ACCGAGGATG ATGCGCCGGT GGACAATTTC
TTCTCCGAAA AGCAGCAGCG CCTGCTGACC GAGCCGCTCT ACAGCGCACG AATGGCGGAA
CGCCTGGGAC GACCGCTGCT GGCGGCGGCG AATGTGGGGG TGTTCTACGG CGAGGGGCAG
CCCGCCATCG TGCCGGACGC GCTGGTGAGC CTGGACGTGG AACTGGCGGC GGACCTGTGG
CCCAAGCCGA ACCGGTCGTA CTTCATCTGG CGCTTCGGCA AGCCGCCGGA CGCGGTGGTG
GAGATTGTGT CGAACCGGGA GGGGGGCGAA CTGGGGTCCA AGCGGGAGCG GTACGCGCAA
TTGGGAGTAG CGTACTACGT GGTGTTCGAC CCGCAGCGGG TGCTGGGGGA GGAGATGCTG
CGGTGCTACG AGTTGCGCGG GCGGACGTAT GCGCCGTGCA CGGGGGGCTG GCTGGAGGAT
ATCGGTCTGG GGGTGCGGTT GTGGGAGGGG GAGTACGAAG GGGTGAGGAC GGTCTGGCTG
CGCTGGTGTG ATCGAGAGGG AAACGTCATC CCGACCGGGG CGGAACTGGC GGAAGCGGAG
CGAGCGCGGG CGGAAGCGGA GCGGCAACGG GCGGAGGAGG AGCAGCGGCG CGCAGAAGCG
GAGCGAGCGC GGGCGGAGGA AGCGCAGCGG CGCGCCGAGG CGGAGCGAGC GCGGGCGGAG
GAAGCGCAGC GGCGCGCGGA GGAAGCCCGC CAGCAGGCCG CAGCAGAGCG GCAGCGAGCA
GAAGAAGAGC AGCGGCGCGC CGAGGCGGAG CGGCAACGAG TGAAGGAAGC GCAGCGGCGC
GCGGAAGAAG CCCGCCAGCA GGCCGCAGCG GAGCGGGCGC GAGCGGAGCG CCTGGCGGCG
CGGTTGCGCG CGCTGGGGAT TGATCCGGAC GCCGAAGCGC TGTAG
 
Protein sequence
MTVTIPATAP EVDPTKPPPA EYLPDYDQFV TEDDAPVDNF FSEKQQRLLT EPLYSARMAE 
RLGRPLLAAA NVGVFYGEGQ PAIVPDALVS LDVELAADLW PKPNRSYFIW RFGKPPDAVV
EIVSNREGGE LGSKRERYAQ LGVAYYVVFD PQRVLGEEML RCYELRGRTY APCTGGWLED
IGLGVRLWEG EYEGVRTVWL RWCDREGNVI PTGAELAEAE RARAEAERQR AEEEQRRAEA
ERARAEEAQR RAEAERARAE EAQRRAEEAR QQAAAERQRA EEEQRRAEAE RQRVKEAQRR
AEEARQQAAA ERARAERLAA RLRALGIDPD AEAL