Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4444 |
Symbol | |
ID | 5211429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5567971 |
End bp | 5568975 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640598023 |
Product | hypothetical protein |
Protein accession | YP_001278726 |
Protein GI | 148658521 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0323466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTGA CTATTCCGGC GACCGCGCCG GAGGTGGACC CGACCAAACC GCCGCCGGCG GAGTATCTGC CGGACTATGA CCAGTTCGTG ACCGAGGATG ATGCGCCGGT GGACAATTTC TTCTCCGAAA AGCAGCAGCG CCTGCTGACC GAGCCGCTCT ACAGCGCACG AATGGCGGAA CGCCTGGGAC GACCGCTGCT GGCGGCGGCG AATGTGGGGG TGTTCTACGG CGAGGGGCAG CCCGCCATCG TGCCGGACGC GCTGGTGAGC CTGGACGTGG AACTGGCGGC GGACCTGTGG CCCAAGCCGA ACCGGTCGTA CTTCATCTGG CGCTTCGGCA AGCCGCCGGA CGCGGTGGTG GAGATTGTGT CGAACCGGGA GGGGGGCGAA CTGGGGTCCA AGCGGGAGCG GTACGCGCAA TTGGGAGTAG CGTACTACGT GGTGTTCGAC CCGCAGCGGG TGCTGGGGGA GGAGATGCTG CGGTGCTACG AGTTGCGCGG GCGGACGTAT GCGCCGTGCA CGGGGGGCTG GCTGGAGGAT ATCGGTCTGG GGGTGCGGTT GTGGGAGGGG GAGTACGAAG GGGTGAGGAC GGTCTGGCTG CGCTGGTGTG ATCGAGAGGG AAACGTCATC CCGACCGGGG CGGAACTGGC GGAAGCGGAG CGAGCGCGGG CGGAAGCGGA GCGGCAACGG GCGGAGGAGG AGCAGCGGCG CGCAGAAGCG GAGCGAGCGC GGGCGGAGGA AGCGCAGCGG CGCGCCGAGG CGGAGCGAGC GCGGGCGGAG GAAGCGCAGC GGCGCGCGGA GGAAGCCCGC CAGCAGGCCG CAGCAGAGCG GCAGCGAGCA GAAGAAGAGC AGCGGCGCGC CGAGGCGGAG CGGCAACGAG TGAAGGAAGC GCAGCGGCGC GCGGAAGAAG CCCGCCAGCA GGCCGCAGCG GAGCGGGCGC GAGCGGAGCG CCTGGCGGCG CGGTTGCGCG CGCTGGGGAT TGATCCGGAC GCCGAAGCGC TGTAG
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Protein sequence | MTVTIPATAP EVDPTKPPPA EYLPDYDQFV TEDDAPVDNF FSEKQQRLLT EPLYSARMAE RLGRPLLAAA NVGVFYGEGQ PAIVPDALVS LDVELAADLW PKPNRSYFIW RFGKPPDAVV EIVSNREGGE LGSKRERYAQ LGVAYYVVFD PQRVLGEEML RCYELRGRTY APCTGGWLED IGLGVRLWEG EYEGVRTVWL RWCDREGNVI PTGAELAEAE RARAEAERQR AEEEQRRAEA ERARAEEAQR RAEAERARAE EAQRRAEEAR QQAAAERQRA EEEQRRAEAE RQRVKEAQRR AEEARQQAAA ERARAERLAA RLRALGIDPD AEAL
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