Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4437 |
Symbol | |
ID | 5211422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5560442 |
End bp | 5561437 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640598016 |
Product | glycosyl transferase family protein |
Protein accession | YP_001278719 |
Protein GI | 148658514 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.749326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAC TCCTATCAAC CGTCATCGTT AACAGTGACG GATGCGCCGA TACGCTGCGT TGCCTGGAGT CACTTTTCGC TCATCCGCCG GATCTCGCGA CACTCGCCCG GCTCGTTGAC GCTCTCCCAG AGCACGAAAT CATTCTGGTC GATAATCGGT CACGCGATGG ATGCGTGGCG CAGGTGCGTG AACGCTTTCC TTCAGTGAAG ATTATCGAGT CTCCGACACG CCAGGGATTT TCCCGGAATT ACAATCTTGG CATTCGACAG ACGAGCGGGG TATTTGTTCT GGTGCTCAAT AATGATACGC TCGTGCATCC CGGCGCTTTG ACAACACTAC TGAACGTCAT GATCGAAACT CCATCATATG GGATGGCAGG TCCGCGTCTA GTCGGGCGCG ATGGATGGGT GCAGGCAGTT TGTGCACGTC CAGTTCTGAC GCCTCGGGAG TATCTCCTGA CGCAATCGAT CGCTGATCCT GGTTTTCCAA TAGGACGACT ATGGCTGTTG TATCAGCAGA TGAGCGTCGC GCGTCGGCGG AGTGGTCTGG CGCCGTGCAT CAGCGGCGCA TGTATGCTGG TGCGGCGGAC GGCTTTTGAG CAGACCGGGC TTTTCGATGA AGCGGTCGAT TTCTACTACG AAGATATTGA ATGGTGTCAT CGCATGGCAT GTTATGGCTG GCAGGTGGGG TATGTCGCAG AGGCGACTAT TACGCATATC GGGGATCAAT CGATCAGCAA AGTCAAAGTC TGGGCAAAAC AGAGCGAATA CTTCAGTGCA CTGCGCTACT TTCGTCGCTA TCATCACCTT ACCGACCAGG ACGCTCGTGT TCTGCGCATT GTGACCTCGT TTGGATGGTT GATGCGAGGA ATTACGTTCT TACTCGCTGA AGGATTGTTT GGATACAAAG GGCATGCCCG CGCCTATCTC TATCTCTGGA AATGGATTTT GAGCGACCCT TCCGCAGATG GTACGCAGGC GCAGAGGAAG CAATGA
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Protein sequence | MRPLLSTVIV NSDGCADTLR CLESLFAHPP DLATLARLVD ALPEHEIILV DNRSRDGCVA QVRERFPSVK IIESPTRQGF SRNYNLGIRQ TSGVFVLVLN NDTLVHPGAL TTLLNVMIET PSYGMAGPRL VGRDGWVQAV CARPVLTPRE YLLTQSIADP GFPIGRLWLL YQQMSVARRR SGLAPCISGA CMLVRRTAFE QTGLFDEAVD FYYEDIEWCH RMACYGWQVG YVAEATITHI GDQSISKVKV WAKQSEYFSA LRYFRRYHHL TDQDARVLRI VTSFGWLMRG ITFLLAEGLF GYKGHARAYL YLWKWILSDP SADGTQAQRK Q
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