| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4428 |
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| Symbol | |
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| ID | 5211413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5548784 |
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| End bp | 5550535 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640598007 |
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| Product | glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_001278710 |
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| Protein GI | 148658505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.586345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TTGAACGTTT TGAAGACCTT GAGGCGTGGC AGCGTGCACG GGAGCTTACC
AACGTTATCT ACGATATGTC CGATGTCGGT GCGTTTGCGC GCGATTTCGC GCTGCGTGAC
CAGATACGCC GCGCAGCGGT GTCTATCATG TCAAACATCG CCGAGGGCTT CGAAAGCCGC
ACCTCGAGAC TTTACATCGA ACACCTGGGA AGAGCAAAAG CCTCGTGCGG CGAAGTTCGT
TCACAACTGT ATCTGGCATA CGATCGCCAG TATGTGTCAG GTGAGGTCTT CGAGCAGACT
CTTGCTCTGG CAGAAAGTGT CAGCCGATTG ACCCACGGTT TGATCCGGTA TCTGTCGAAT
GCCAGGATCA ACGAAATCCG AGAAGACACA GCCTGCTACG CTGAATATGC AGTGTCATAC
GCTTCAAATT TCGCGTCCGT GCACTACCAG GAGGTCACAG TGACAACCAA TGAATCTCAA
GTACCGCCTG CATCGGAGGC GTCACCTTCC CACCTTCAAC CTTCCCACCT TCAACCTTCC
CACCTTCAAC CTTCCCACCT TCAACCTTCC GTGCCTCTAC TGGATCTCAA AGCGCAGTAC
ACCGCCATCC GCGACGAGAT TCGCGCCGCC ATCGATCGTG TCGCCGATGC GCAGCAGTTT
ATTCTGGGTC CCGAAGTCGA AGCGCTGGAG CGCGAGGTTG CCGCGTACTC CGGGTGCGCC
TATGGCATTG GCGTATCGTC AGGCACCGAT GCGCTGCTGG TAGCGCTCAT GGCGATTGAC
ATTCGTCCAG GCGACGAGGT GATCACCACC CCCTACACCT TCTTCGCCAC CGCCGGTTCG
ATTGCCCGGC TTGGCGCTGT GCCGGTATTC GTCGATATCG ACCCGCTGAC GTTCAACATC
GACCCGACTG CCATCGAGGC GCGGATCACG CCGCGCACCC GTGTGATCAT GCCGGTGCAT
CTGTACGGTC AGATGGCTGA CATGGATCCA ATTATGGACA TCGCACAGCG CCACGGTCTG
GTTGTGATCG AAGATGCAGC GCAGGCCATC GGCTCGGAGT ACAAAGGACG ACGTGCAGGC
TCAATCGGGC ATATGGGATG CTTCAGTTTC TTCCCCTCCA AGAACCTGGG CGGTTTCGGC
GACGGCGGCA TGGTCACCAC CAACGATGCT GCGCTCGCGG AGCGGATCCG TTTGTTGCGC
GGGCATGGCG CGCATCCCAA GTACTACCAC AAACTGATCG GCGGCAACTT TCGCCTCGAT
GCCCTGCAGG CTGCCGTGCT GCGGGTCAAG TTGAAGTATC TGGATGACTG GACGGCAGGT
CGGCAGCGGA ATGCGGCGAC CTACCGACGC CTGTTCGCCG AAGCAGGGTT GACCATCGAC
CCGCCTTCCT GTCTGACTGC CGGGTGTCAC GCGCGCAACA AAGGCGACTG CACGCTGCCG
CCGGGCAGGG TCGTGCTGCC GGTTGAAGCG CCAGACCGCA GGCATATCTA CAACCAGTTC
GTCATCCGCA TGGCGCAGCG GGATCGAGTG ATGGCGGCGC TCAAAGCCCG CCAGATTGGT
CATGAGATCT ACTACCCTGT GCCATTACAC CTGCAAGAAT GCTTTGCTTA CCTGGGGCAG
CGTCCCGGCG ATCTGCCAGC GAGCGAATGC GCCGCCGCCG AAACGCTGGC GTTGCCGATC
TACCCGGAAC TGACCGACGC CATGCTGGCG GCAGTGGTCG AGGCAGTGGC GGCGGGGGTA
CGGGAAGCCT GA
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| Protein sequence | MATIERFEDL EAWQRARELT NVIYDMSDVG AFARDFALRD QIRRAAVSIM SNIAEGFESR
TSRLYIEHLG RAKASCGEVR SQLYLAYDRQ YVSGEVFEQT LALAESVSRL THGLIRYLSN
ARINEIREDT ACYAEYAVSY ASNFASVHYQ EVTVTTNESQ VPPASEASPS HLQPSHLQPS
HLQPSHLQPS VPLLDLKAQY TAIRDEIRAA IDRVADAQQF ILGPEVEALE REVAAYSGCA
YGIGVSSGTD ALLVALMAID IRPGDEVITT PYTFFATAGS IARLGAVPVF VDIDPLTFNI
DPTAIEARIT PRTRVIMPVH LYGQMADMDP IMDIAQRHGL VVIEDAAQAI GSEYKGRRAG
SIGHMGCFSF FPSKNLGGFG DGGMVTTNDA ALAERIRLLR GHGAHPKYYH KLIGGNFRLD
ALQAAVLRVK LKYLDDWTAG RQRNAATYRR LFAEAGLTID PPSCLTAGCH ARNKGDCTLP
PGRVVLPVEA PDRRHIYNQF VIRMAQRDRV MAALKARQIG HEIYYPVPLH LQECFAYLGQ
RPGDLPASEC AAAETLALPI YPELTDAMLA AVVEAVAAGV REA
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