Gene RoseRS_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4388 
Symbol 
ID5211372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5500809 
End bp5501546 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content64% 
IMG OID640597967 
Producthypothetical protein 
Protein accessionYP_001278671 
Protein GI148658466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC AACCACCACA ACTGAACGAT CGCGACCTGG AGTTAATCTC TGCCTACATC 
GATGGGCAGT TGAGCGCCGA AGAGCGTCGT GAAGTCGAGC GCCGTCTCGA TAATGAGGCG
AATCTGCGGC TGGCGTATGA GGAGTTGCGC GCAACGGTGC AGGTACTGCG CGACCTTGAG
CCGGTGCGCC CGCCACGCTC ATTTACGCTC GATCCGGCAA ACGTTGCGCT GCAACGACCA
CCCGCGACAC GATTGGGTTG GGGGCGGTTG CTTCAGGTTG CCGGCGTGTT TGCTGCGGTG
CTGGTTGCTG CAATCGGAAC GTTGAGCGTG ATCGGTTCGC TGGGGAGCGG CGCCCCGGCA
TCGGTGCCAA TGGTTGCTGC CCCCACACCT GCGCCAGCGT CTCCTTTAGA ACTGCGCGAA
AGTGCGCCGA CTCCAGAGCG CAGCGACATT GCAGCAGCGC CAGCGGCGCT CGATGATGGA
TCGGGACCGG TTGCGCCCCA GGCACGTGCG ACGGTCGTTG CGACGGAAGT CGCCGCACTT
CCCGACGTTG CTCCGCAACC AACCATCGTG ACCACGCCAG CGATTTCGTC GCCGGGAACG
GTTGATCTTG CTCGACCAAA GCCACCTGCC GATTCGACGC CGCCTGCCAC TCCTCCTGAT
CTGACCCTTC TGCTCACGCT GGCTGTTGTG GCGCTGGCAG CTGGCGGCGT GCTGCTCTGG
CGCCGTCGTA AAGGATAG
 
Protein sequence
MTTQPPQLND RDLELISAYI DGQLSAEERR EVERRLDNEA NLRLAYEELR ATVQVLRDLE 
PVRPPRSFTL DPANVALQRP PATRLGWGRL LQVAGVFAAV LVAAIGTLSV IGSLGSGAPA
SVPMVAAPTP APASPLELRE SAPTPERSDI AAAPAALDDG SGPVAPQARA TVVATEVAAL
PDVAPQPTIV TTPAISSPGT VDLARPKPPA DSTPPATPPD LTLLLTLAVV ALAAGGVLLW
RRRKG