| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4275 |
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| Symbol | |
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| ID | 5211259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5361556 |
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| End bp | 5362236 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597862 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001278566 |
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| Protein GI | 148658361 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.798613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.287125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGATCA ACCCGATTGC TCCAGTCACG TCTTCGCCTG TGCGCGTGCT GATAGTAGAC
GATCACGAAC TGGCGCGCGC CGGGATTGCG GCAGTGCTGA TGCGCGAACC GGGCATCGAA
GTTATCGGTG AGGCGGGCGA CGGCGCCGCC GCACTTGATT TTGTGTCGCG CCATCCGGTA
GACCTGGTGA TGATGGATCT GCAGATGCCT GGGATGGACG GGATCGAGGC GACGCGGCGG
ATCAAGGCAT TGTGCCCCGC CATTCGGGTG ATTATGGTGA CGGTGCAGGC AAAACCCGAT
GCGTTAATGG ACGCGCTGCG CGCTGGCGTC GCCGGGTACC TGCTGAAGGA CGCGAGTCGG
CGCGAGATCA TCGGCGCAGT GCGGCAGGTG CTGCGCGGCG ACGCGTTCCT GAACCCCGAT
CTGGTTATGC AGACGCTGCG GCGTCTGGCA AGCGCCACAC CCGATGATGA GCCGCCGGTC
GAGCCGCTGA CGGCGCGTGA GCAGCAGGTG CTCAAGTTGT TGATGCAGGG CAAAACCAAC
CGCGAGATTG CGCGTGAACT GATCATCAGT CCGGGGACGG TTAAAGTTCA CGTGGAGCAC
ATCATCGCCA AACTGGGCGT TTCGGATCGC ACGCAGGCAG CGGTGCGCGC GCTGGAGTTG
GGGTTGGTTT CGTTGTCGTG A
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| Protein sequence | MTINPIAPVT SSPVRVLIVD DHELARAGIA AVLMREPGIE VIGEAGDGAA ALDFVSRHPV
DLVMMDLQMP GMDGIEATRR IKALCPAIRV IMVTVQAKPD ALMDALRAGV AGYLLKDASR
REIIGAVRQV LRGDAFLNPD LVMQTLRRLA SATPDDEPPV EPLTAREQQV LKLLMQGKTN
REIARELIIS PGTVKVHVEH IIAKLGVSDR TQAAVRALEL GLVSLS
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