Gene RoseRS_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4192 
Symbol 
ID5211176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5251386 
End bp5252222 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID640597780 
Producthypothetical protein 
Protein accessionYP_001278485 
Protein GI148658280 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00269295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCGC CTGCACGCCG TCGTTTCCGC GCCATAGCCC AACTGCCTGA CGACCAGATC 
AATCTGGCGG AGGCGGCGCT CTGTATTGCC TGGGAAGATC AGGGTGAGGG CAATCCGTCT
GCTTCGTTGC GACGCATTGA TGCGCTGGCG GCAACTGCGC AGGAGCGTAT CGCAGGAAGG
CGTGGTTCGC GCGCAATTGT GGCAGCACTG AATGTCTACC TGTTCGATGA ACTTGGCTTT
CGCGGCAACT TCTGGGATTA CAGTGATCCC GGCAACAGTT TCCTCGATCA GGTGATCGCG
CGACGTGTCG GTCTGCCTAT TCTGCTGTCG GTGCTCTATC TGGAGATCGG CTGGCGGTTG
CATCTGCCGG TAGTGGGTCT GGCACTGCCG GGACATTTTC TGGTGCGTTA TGTTGATCAG
CAGAACGGCG ACCTCTACAT CGATCCTTTC AATCGCGGAA GATTGTGGTC ACTGGCGGAA
TGTGAGCGAC AGATCGCCTC GTTTGCGGGC ACAATCAATC CAGCCCTGGT GCAGCAGATC
ATGGCGCCGC CGTCGCCGCG CTCAATTCTG CTGCGCATAT TGCGTAATCT GAAAGGCGCC
TATATTCAGC GCGAGCAGTT CGAACGCGCG CTGGCGGCGG TTGATCGGAT GCTGCTGCTC
TCGTTCGATG CCGCCGAATT GCGCGACCGC GGGTTGCTAC GCGCGCGCCT GGGGCACTGG
TCAGGCGCGC TGGCGGACCT TGAACGGTAT GCGCATATGG CGCCACAGGC GAGCGATCTG
GAGACCATCC GCCGTCAGGT GCGGGCGCTG GCAGAAGCAA TGATACCGCT GAACTAG
 
Protein sequence
MTSPARRRFR AIAQLPDDQI NLAEAALCIA WEDQGEGNPS ASLRRIDALA ATAQERIAGR 
RGSRAIVAAL NVYLFDELGF RGNFWDYSDP GNSFLDQVIA RRVGLPILLS VLYLEIGWRL
HLPVVGLALP GHFLVRYVDQ QNGDLYIDPF NRGRLWSLAE CERQIASFAG TINPALVQQI
MAPPSPRSIL LRILRNLKGA YIQREQFERA LAAVDRMLLL SFDAAELRDR GLLRARLGHW
SGALADLERY AHMAPQASDL ETIRRQVRAL AEAMIPLN