Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4192 |
Symbol | |
ID | 5211176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5251386 |
End bp | 5252222 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597780 |
Product | hypothetical protein |
Protein accession | YP_001278485 |
Protein GI | 148658280 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00269295 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTCGC CTGCACGCCG TCGTTTCCGC GCCATAGCCC AACTGCCTGA CGACCAGATC AATCTGGCGG AGGCGGCGCT CTGTATTGCC TGGGAAGATC AGGGTGAGGG CAATCCGTCT GCTTCGTTGC GACGCATTGA TGCGCTGGCG GCAACTGCGC AGGAGCGTAT CGCAGGAAGG CGTGGTTCGC GCGCAATTGT GGCAGCACTG AATGTCTACC TGTTCGATGA ACTTGGCTTT CGCGGCAACT TCTGGGATTA CAGTGATCCC GGCAACAGTT TCCTCGATCA GGTGATCGCG CGACGTGTCG GTCTGCCTAT TCTGCTGTCG GTGCTCTATC TGGAGATCGG CTGGCGGTTG CATCTGCCGG TAGTGGGTCT GGCACTGCCG GGACATTTTC TGGTGCGTTA TGTTGATCAG CAGAACGGCG ACCTCTACAT CGATCCTTTC AATCGCGGAA GATTGTGGTC ACTGGCGGAA TGTGAGCGAC AGATCGCCTC GTTTGCGGGC ACAATCAATC CAGCCCTGGT GCAGCAGATC ATGGCGCCGC CGTCGCCGCG CTCAATTCTG CTGCGCATAT TGCGTAATCT GAAAGGCGCC TATATTCAGC GCGAGCAGTT CGAACGCGCG CTGGCGGCGG TTGATCGGAT GCTGCTGCTC TCGTTCGATG CCGCCGAATT GCGCGACCGC GGGTTGCTAC GCGCGCGCCT GGGGCACTGG TCAGGCGCGC TGGCGGACCT TGAACGGTAT GCGCATATGG CGCCACAGGC GAGCGATCTG GAGACCATCC GCCGTCAGGT GCGGGCGCTG GCAGAAGCAA TGATACCGCT GAACTAG
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Protein sequence | MTSPARRRFR AIAQLPDDQI NLAEAALCIA WEDQGEGNPS ASLRRIDALA ATAQERIAGR RGSRAIVAAL NVYLFDELGF RGNFWDYSDP GNSFLDQVIA RRVGLPILLS VLYLEIGWRL HLPVVGLALP GHFLVRYVDQ QNGDLYIDPF NRGRLWSLAE CERQIASFAG TINPALVQQI MAPPSPRSIL LRILRNLKGA YIQREQFERA LAAVDRMLLL SFDAAELRDR GLLRARLGHW SGALADLERY AHMAPQASDL ETIRRQVRAL AEAMIPLN
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