Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4126 |
Symbol | |
ID | 5211110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5169332 |
End bp | 5170048 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597715 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_001278420 |
Protein GI | 148658215 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGG TTATCGCTCA TCGCGGCGCA TCAGCTTACG CGCCGGAGAA TACACTGCGC GCATTTGAAC TTGCCGTGCG TCAGGGCGCC GATATGTGCG AACTCGATGT GCAGCGGACG GCGGACGGCG TGCTGGTGGT GTTTCATGAT GATACAACAG ACCGCTGGGA GGCGCAGGGA CGACCGGTAG CGCACTGCAC CCTCGCCGAT CTGCGGCGAC TCAATATTGG CGGCGAACGT GTCGCAACCC TGGCTGAGGT GTGCGCATTC GCCCGGGAAC GTGGTATACA GTTGAATGTC GAGATCAAAG GCGTCGGCAT TGGCGGCGAG GTCGTGCGTC TGTTGCGCAA CGAACGGGTG ATCGACCAGG TGCTGATTTC ATCATTCTGG CCCGCAGCGC TGGCTGAAGT GGCTGCGGTT GCGCCCGATC TGCCGCGCGC CTGTTTGATG GGCATCCCCA CCTTTCGCCC TGATGTGCGC CTGCGTGAAA GCTGGCCCTT CCTCGACCTC AAAAAAGCCG GGGTTGTGGC ATGGCACCCT GCGTATCAGA TTCCATTGCT TGATCACATC CTGCCGCTCG TGCGTCGTGC GGGGTATCGC GTCAATGTCT GGACGGTCAA CGACCCGGAA GAGATGCGGC GCTTTGTGAT GCTCGGCGCC GATGGAATCA TCACCGACGT GCCGGATGTG CTGCGGTGCG TCCTGAAACA GACTTGA
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Protein sequence | MTLVIAHRGA SAYAPENTLR AFELAVRQGA DMCELDVQRT ADGVLVVFHD DTTDRWEAQG RPVAHCTLAD LRRLNIGGER VATLAEVCAF ARERGIQLNV EIKGVGIGGE VVRLLRNERV IDQVLISSFW PAALAEVAAV APDLPRACLM GIPTFRPDVR LRESWPFLDL KKAGVVAWHP AYQIPLLDHI LPLVRRAGYR VNVWTVNDPE EMRRFVMLGA DGIITDVPDV LRCVLKQT
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