Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4070 |
Symbol | |
ID | 5211053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5100605 |
End bp | 5103082 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597658 |
Product | ATPase |
Protein accession | YP_001278364 |
Protein GI | 148658159 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTCG AACGGTTTAC CGAGAAGGCG CAGGAAGCGT TTCAGGATGC GCAGGAAATC ATGCACGATC AGCACCACAC CCAGCTGGAC GTTGAGCATA TTTTCCTGGC GATGTTGCGG CAGCGCGACG GGCTGACCGC GCGTGCAATC GCGCGTCTTG GCGTGGATGC CGACATGGTC GCGCGGCGCG TCGAGCACGA GCTTGAAAAA TCGCCCAAAG TGTACGGTCA GTACGGGTAT GGCAATCAGG TATACATTAC GCCGCGCACG CAACGCCTGG TCAAGCGCGC CGAGGAAGAA GCCAATCGTC TGAATGACCA GTATGTCGGC ATTGAACATC TGCTGATTGC GATCAGCGGC GAGCGCGAAG GGGCGTCATC GCGCATTCTG AACAGTTTCG GCATCGATCA GGAACGCATT TATCAGGCGC TGATGGATAT TCGCGGGCAT CAGCGTGCCG ATAACCCCAG CGCTGAGGCG CGTTATGAGG CGCTCTCGAA ATACTCCATC GACCTGACCG ACCTCGCGGC GCAGGGGAAA CTCGATCCGG TGATCGGTCG CGATGCCGAA ATCACGCGCG TTATCCGCAT TCTCTGCCGT CGCACGAAGA ATAATCCTGT CCTCGTCGGC GAAACCGGCG TCGGCAAAAC GGCGATTGCC GAGGGTCTGG CGCAGCGTAT CGCCAGCGGC GATGTGCCGC TGCCGTTGAA GAACCGCAGG TTGCTGGCGC TCGATCTGGC AGGGATGGTT GCCGGCTCGA AGTTCCGCGG CGAGTTCGAG GAGCGCCTCA AGGCGGTGAT GGACGAGGTG CGCAGCAGCG AGGGACAGAT CATCCTGTTC ATCGACGAAC TGCACACCGT GGTCGGCGCA GGCGCTGCGG TCGGATCGAT CGATGCCTCG AATATGCTGA AGCCGGCGCT CTCGCGCGGC GAAGTTCAGG TGATCGGCGC CACCACCATC GATGAGTATC GCAAGCACGT TGAAAAGGAT GCGGCGCTTG AACGGCGCTT CAGCCCGGTG TTCGTGGAAG AACCCGACGT TGAAACAACC GTCGAGATGC TGCGCGGTCT GCGCAAACGC TATGAAGAGC ACCATCAACT GACGATCAGC GATGAGGCGT TGCAGGCTGC CGCGCGCCTG TCGAGTCGCT ACATTACCGA TCGTTTCCTG CCCGACAAGG CGATTGACCT GATCGATGAG GCGTCCGCCA AACTGCGCAT CGACATTTAT TCCATGCCCA AGGCGCTGCG CGAACAGGAA GCCGAACTGA ACCGCCTGCG TCGTGAAGAA GAAGAGGCGG GCGCGCGCCG TGAGTATGAA CGCGCTGCCA TGTTGCGGGC ACGCTATCTG CAACTCGAAA CCGAGTTCGA GCACGCGCGC AGCGAATGGC TCAAGAGTTC GAACCTCGAT GAGGTGGTCG ATGAGGAAGA TGTCGCCGCC ATCGTCTCGA CCTGGACGGG CATTCCGGTC AATCGCATGC TGGAGACCGA GCGCGAGAAG TTGATCGACA TGGAGGCGCG CCTCCACGAA CGGGTGATCG GTCAGCATGA GGCGATTGTT GCGCTTTCCG ATGCGATTCG GCGCGCTCGC AGCGGTCTGA AGGACCCGCG GCGACCGATC GGCAGTTTTA TCTTCGTCGG TCCAACCGGC GTCGGTAAGA CAGAACTCGC CAAAGCGCTC GCCGAGTTCC TCTTCGACAG CGAAGACGCA ATGACGCGCG TCGATATGTC GGAGTTCCAG GAACGGCACA CCGTGTCGCG TTTGATCGGC GCGCCGCCTG GCTATGTGGG ATACGAGGAG GCGGGTCAGT TGACCGAAAG TATTCGCCGC CGCCCCTACC AGGTGGTGCT GTTCGATGAG ATCGAAAAGG CGCACCCGGA CGTGTTCAAT ACGCTGCTGC AACTGCTCGA CGATGGTCGC CTGACCGATG CGCAGGGGCA TACGGTTGAT TTCCGCAATA CAGTCATCAT CATGACCTCG AATGTCGGCA CGGAACATGT GCGTCAGCAG AGCCTCGGTC TGGTGCGCAC CCACGACCGA AATGCCGAGG AGGCCGCGCG CGAGCGGGTG TTTGAGGCGC TTCGACAGGC GTTCCGCCCC GAGTTCCTCA ACCGTATCGA CGAGATTATC GTCTTCCACG CTCTCACCGA ACAGGAGTTG ATGCAGATCG TCGATCTGCT GGTGCGCGAG GTCGATGAGC GTCTGCGTGA GCAGGGGTTG ACACTCGAAC TGACCCCGAC AGCGAAGAAG TTGCTGGTGC GCGAAGGGTA CAACCCGGCT TACGGGGCGC GCCCGCTCCG TCGCACGGTG CAACGCCTGG TCGAAACGCC GCTGTCGCGC AACCTGCTGC GCGGTTTGTT CAAACCCGGC GATACCATCC TCGTCGATGT CGATCCGCAG ACCGATGCGT TGACCTTCAC GCGACGCGAG ACGCTCGATC TGGAGGTGAA GAAGCCGGTC GAGCCGGTGA GCGGGTAA
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Protein sequence | MRLERFTEKA QEAFQDAQEI MHDQHHTQLD VEHIFLAMLR QRDGLTARAI ARLGVDADMV ARRVEHELEK SPKVYGQYGY GNQVYITPRT QRLVKRAEEE ANRLNDQYVG IEHLLIAISG EREGASSRIL NSFGIDQERI YQALMDIRGH QRADNPSAEA RYEALSKYSI DLTDLAAQGK LDPVIGRDAE ITRVIRILCR RTKNNPVLVG ETGVGKTAIA EGLAQRIASG DVPLPLKNRR LLALDLAGMV AGSKFRGEFE ERLKAVMDEV RSSEGQIILF IDELHTVVGA GAAVGSIDAS NMLKPALSRG EVQVIGATTI DEYRKHVEKD AALERRFSPV FVEEPDVETT VEMLRGLRKR YEEHHQLTIS DEALQAAARL SSRYITDRFL PDKAIDLIDE ASAKLRIDIY SMPKALREQE AELNRLRREE EEAGARREYE RAAMLRARYL QLETEFEHAR SEWLKSSNLD EVVDEEDVAA IVSTWTGIPV NRMLETEREK LIDMEARLHE RVIGQHEAIV ALSDAIRRAR SGLKDPRRPI GSFIFVGPTG VGKTELAKAL AEFLFDSEDA MTRVDMSEFQ ERHTVSRLIG APPGYVGYEE AGQLTESIRR RPYQVVLFDE IEKAHPDVFN TLLQLLDDGR LTDAQGHTVD FRNTVIIMTS NVGTEHVRQQ SLGLVRTHDR NAEEAARERV FEALRQAFRP EFLNRIDEII VFHALTEQEL MQIVDLLVRE VDERLREQGL TLELTPTAKK LLVREGYNPA YGARPLRRTV QRLVETPLSR NLLRGLFKPG DTILVDVDPQ TDALTFTRRE TLDLEVKKPV EPVSG
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