Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4043 |
Symbol | |
ID | 5211026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5066014 |
End bp | 5066736 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597631 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001278337 |
Protein GI | 148658132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.362631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGT CTGATTATCT TGCCGTGCTG CGGCGTCGCT GGTGGGTTAT CCTGCTGACG ATGGTGGTGG CAGTGGCAAG CGCGCTGATA TTCAGTCGCC TCCAGGAGCG CATCTACCGC TCAGAGGCGA GTTACCTGGT CGTGCCAAAC CGGATCGACA ATGGGCTATC GATTGTGCTC CAGAACAGTA TGAGCAGTTT CCGCGAGATG GCGCTGGCGC GACCGCAGTT GCAGAAGATC AGCGACGAAC TCAAACTCGA CCGGACGCCC GAATGGTTGC TGAAGCGTGT TGCGATCCAG CCGCGCCCGG ACGAACGCAA GATGATTGTG CAGGTCGACT ACCCCGATCC GGCAACGGCG CAGCGACTGG CGGACGCGAT CGGCAACAAT ATGGTTGCGC TGGTCAGCGC ACGGAACAAC TTTCTTGAAG GAACGGATCG GATCAGCATG ACGGTTCTGG AACCGGCAAC GCCGCCGGTG CTCCACCGCC CGCAGACGCG CGTCAATATG CTTGCTGGCG CAGTGCTTGG TCTGGTGCTC GGCGTGCTGC TGGCATTTGT GCTGGAGGCG CTCGACGACA CCATCAAAAC GCCGTCTGAT GTCGAACGGT ATGTTCAACT GGCGACGCTC GGCGCTATTC CTGCAGTGAG CAGCGACTCC AGAGGAGCGA CATTCACGGC GAGACGTGCG CGCAAAAATG AAGAGTTGGA AGTTGTTCCG TAG
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Protein sequence | MQLSDYLAVL RRRWWVILLT MVVAVASALI FSRLQERIYR SEASYLVVPN RIDNGLSIVL QNSMSSFREM ALARPQLQKI SDELKLDRTP EWLLKRVAIQ PRPDERKMIV QVDYPDPATA QRLADAIGNN MVALVSARNN FLEGTDRISM TVLEPATPPV LHRPQTRVNM LAGAVLGLVL GVLLAFVLEA LDDTIKTPSD VERYVQLATL GAIPAVSSDS RGATFTARRA RKNEELEVVP
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