Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4040 |
Symbol | |
ID | 5211023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5062560 |
End bp | 5063945 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597628 |
Product | hypothetical protein |
Protein accession | YP_001278334 |
Protein GI | 148658129 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCT TTCGTCTGGA TCGAAGGAGC AAAGCAGTGA AGATTCCTCT CTCCTGGCGT CAGGTAGCGC TTATTGCGCT GCTCGGCGTG CTGACGCCAC TCTTCGCCGC GTGCGGCGGC GCGCCTGCAT CACAGGGAAC CACGCTGCCG ACCGCGGTTA TCAATGCGCC AACGTTGCCG CCTGTGGCGG CGACGGTCAA TCCTATCTCT CCAGTGCCCA CCGCAACCTC AGATAATCCA GCGCCGACGC CTGTTCCTCC ATCGCCCACG GCAGCGCCGG TTGAGTTGAC ATTCCCGCTC CGCTTGCCGC AGCCGGAACA CGGAGTCGTG GCGCACCTCT ACTACACCGA TCGTGAGCGG GTGTTGACGC TCACCGAAAT TGCCGGGTAT ACCTGGGTGC GCCAGCAGAT CCAGTGGAAG GACATCGAAG GACCGGAACC GGGCGATTAC AAGTGGGGCG AACTCGACAA CATCGTCGAC GACGTTGCCG CGCGAAACCT CAATCTGCTG ATCAGCATCG TCAAGGCGCC ATCGTTCTAC AATCCGACGA ACGGCTTGCC GCGTGATCCG GTGACTATGG GGAACTTCGT CGAGGCAATG GTTCGACGGT ATGGCACAAA GATCAAGGCG ATCGAGATCT GGAACGAACA GAATCTGGCG GTCGAAAACG GCGGCCGCGT GACTGTCGAG GATGCCGGGC ATTATGTCGA AATCCTGGTC GAATGCTACA AGCGGATCAA AGCAGTCGAG CCGCGCATTT TTGTGCTGTC GGGCGCACCC TCGTCAAGCG GCGTTGACGA GCCGTCGCTG GCAGTCTCCG ACGAGCGTTA CTACCGGGCG ATGTATGAAT ATAAAGGCGG GCTGATCAAG GACTATTTCG ATGCCCAGGC AGTGCATCCC GGCGGCGCCG CCAATCCGCC CGACACCCTC TGGCCCGAAA AGCCGAGTTA CATCCAGGGA TGCAAACCGG CGCCAGATCG CTGCTGGAAC GACCATCCGA CGCACTACTT CCGCCATGTC GAGAATGTGC GCAAGTTTAT GGTCGAGGAG GGGGTTGGCG ATCATCAAAT CTGGATTACC GAATTCGGAT GGGCGACGCC GAACAATACT CCCGGCTATG AGTTCGGCAA CTATGTATCG CTTGAACAAC AGCGCGACTA TATCATTACT GCAATGAAGC GCATCGATGA ACTCTATCGC GCGCCGGACG GCAAGCCGTG GGTGGGGGTT GCATTTCTGT GGAATATGAA CTTCGCAGTA CTCTGGGGAG CGCAGGGCAA TCCGGATCAC GAGCAGGCGT CGTTTGGCAT CCTGAACCCC GACTGGAGTC CACGCCCCTC GTTCCTGGCG ATCCAGAGTT ACCTGGCGGA GCGCAAACGG CGGTGA
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Protein sequence | MAVFRLDRRS KAVKIPLSWR QVALIALLGV LTPLFAACGG APASQGTTLP TAVINAPTLP PVAATVNPIS PVPTATSDNP APTPVPPSPT AAPVELTFPL RLPQPEHGVV AHLYYTDRER VLTLTEIAGY TWVRQQIQWK DIEGPEPGDY KWGELDNIVD DVAARNLNLL ISIVKAPSFY NPTNGLPRDP VTMGNFVEAM VRRYGTKIKA IEIWNEQNLA VENGGRVTVE DAGHYVEILV ECYKRIKAVE PRIFVLSGAP SSSGVDEPSL AVSDERYYRA MYEYKGGLIK DYFDAQAVHP GGAANPPDTL WPEKPSYIQG CKPAPDRCWN DHPTHYFRHV ENVRKFMVEE GVGDHQIWIT EFGWATPNNT PGYEFGNYVS LEQQRDYIIT AMKRIDELYR APDGKPWVGV AFLWNMNFAV LWGAQGNPDH EQASFGILNP DWSPRPSFLA IQSYLAERKR R
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