Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3973 |
Symbol | |
ID | 5210956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4972094 |
End bp | 4973023 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597565 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_001278271 |
Protein GI | 148658066 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.629775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.213011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTG CTGCTCACCT GCGCGCCCTT GCGTCGCGCG AGCATCTTTC GATGCGTGAA TTGCGCCCGC TCTCCGGGCT TGGTCCTGAC GCCTACGATG CGCTGTGGGA AACATGGCAG CGCATCCCCG TCAGGCGGCG CACCGAAATC GCACATGCGA TGGTCGAACT CGCCGAAGAC AATATCGACC TCGATTTCAC GATGATGTTT CGGTGGCTGC TTGATGATGC CGACCCGGAG GTTCGCGCCA GCGCCGTGGA AGGATTGTGG GAGTGTACGG ACGTGCCGGT CATGCGGCGG TTGCTGGCGC TCCTGTGCGA TCCCGCCGAT CAGGTGCGCG CCGCCGCTGC TATGGCGCTC GGTCGCTTCG CCTATATGGC GGAGATCGAT GAACTCGATG AGGAATACGG GCGACAGGTG CACGATGCGT TGCTGACGCT CATTCACGAT GCGTCGCAAC CGACGGAAGT GCGCCGTCGC GCTATCGAGA GCGCTGGCTA TTTTGCCGCC AGCAACGATG TGCAGCGACA GATCGAACTG GCATATGCCA GTAGTGATCA GTTGATGCGC GAAAGTGCGC TGGTTGCCAT GGGGCGCTCG ATGTTGCCGC GCTGGCTGCC CATCGTCAGC CGTGAACTTG AGAGTCCGTC CCCGGCGCTT CGCTACGAAG CGGCGCGCGC AGCCGGCGAA ATGGCGGATA TCGCGCGCTC GCTGGTGGCG CGCGTTGTGC GCCTGTGCAG CGATGCGGAT ACTGAAGTGG CGCTGGCAGC GATCTGGGCG CTCGGCCAGA TCGGCGGCGA AACGGCGCGG CGCACCCTGC AACATATCAG CGGCAGCGAA GACGAAGCGC GCAGTCAGGC AGCCGCCGAG GCGCTCGACG AATTGACGCT CGAAGAGGGC TTCTTCGAGA GCGAATGGCG GAACAACTAG
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Protein sequence | MDLAAHLRAL ASREHLSMRE LRPLSGLGPD AYDALWETWQ RIPVRRRTEI AHAMVELAED NIDLDFTMMF RWLLDDADPE VRASAVEGLW ECTDVPVMRR LLALLCDPAD QVRAAAAMAL GRFAYMAEID ELDEEYGRQV HDALLTLIHD ASQPTEVRRR AIESAGYFAA SNDVQRQIEL AYASSDQLMR ESALVAMGRS MLPRWLPIVS RELESPSPAL RYEAARAAGE MADIARSLVA RVVRLCSDAD TEVALAAIWA LGQIGGETAR RTLQHISGSE DEARSQAAAE ALDELTLEEG FFESEWRNN
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