| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3817 |
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| Symbol | |
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| ID | 5210799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4775600 |
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| End bp | 4776778 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597413 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001278121 |
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| Protein GI | 148657916 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.59485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.347226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGA TCATTGCCAC CCTCGTGATT GCGCTCGGAC TGTCGATCGT CTGGGGATGG
CGTCAGCGGC AGATTGCATT ACAATCGCCG CCGCCCCCTC CACAGCATGA TTCATTTTCT
CCGCTTTTTC ACGCCGCCGC CCATGCGTTC GATGATGGAG TTGTGCTGGT CGATGCAGAT
CGTCGCGTTC GCTACATTAA CCGGCAGGCC GAAGAATTGT TGAACCTCAG TCATACCATC
AGCATCGGGC AGGGACTGAT CACGCTTGCG CGTGATTACC AGGTCGATGC TATGGTCGAA
GAGGCGATTG CGTCCGCCGA ACCCCGCGAA AGTATCTTTC AACCGCTTGG GCGCCAGCGA
ACGCTGCGCC TGCGCGCAAT TCCGCTCGAC GACGGCGCAC GCGGCGCGTT GCTGCTGGTG
CGCGATGTGA CGCAACTGAG CCTGCTGGAA CGCGCGCGGC GCGATCTGGT CGCCAACGTC
TCTCACGAAC TCCGCACACC GCTGGCGTCG ATGAAACTCC TGGTCGAAAC GCTGCAATCA
GACCCGCCGC CGCCGGTGGC GAAACGCATG CTGGATCAGA TCGCGCAGGA AGTTGATGCC
ATTACCCAAC TTGTCGAGGA GCTGCACGAA CTGGCGCAGA TCGAGTCAGG GCGCGTGGCA
CTCCAGTTAG TACCCGCGCC GCTGGCACCG CTGGTAGCGC GCACCATTGA GCGCATCCGC
CCGCAAATGG ACCGAAAACA TTTACAGATG ACGACGGATG TCCCTGATGA TCTGCCCCAG
GCGCTGATCG ATTGCAATCG TGTTGGTCAG GTGCTGCTCA ATCTGCTTCA CAACGCCTCG
AAATTCACCC CCGAAGGCGG GTGCGTATCG ATTGCCGCCC GAGTGATTAC GGTCGGCGAC
GGTTCCCCCC CGCCGCCTGG ACTACCACCA TCGCATGCCC CAGGTCAGTG GCTGCTCCTG
TCAGTCACCG ATAACGGCAT CGGCATTCCA GCAACCGACC TCTCGCGGAT TTTCGAGCGC
TTCTACAAGG TTGATCGTGC GCGAACGCGC AATGCTGGCG GCACAGGGTT AGGACTGGCA
ATCGCCAAAC ATCTGGTCGA AGGGCACGGC GGGCGCATCT GGGCGACCAG CATCGAAGGC
GAGGGCAGCA CGTTTTACCT GACATTGCCG GTTGCATAG
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| Protein sequence | MEWIIATLVI ALGLSIVWGW RQRQIALQSP PPPPQHDSFS PLFHAAAHAF DDGVVLVDAD
RRVRYINRQA EELLNLSHTI SIGQGLITLA RDYQVDAMVE EAIASAEPRE SIFQPLGRQR
TLRLRAIPLD DGARGALLLV RDVTQLSLLE RARRDLVANV SHELRTPLAS MKLLVETLQS
DPPPPVAKRM LDQIAQEVDA ITQLVEELHE LAQIESGRVA LQLVPAPLAP LVARTIERIR
PQMDRKHLQM TTDVPDDLPQ ALIDCNRVGQ VLLNLLHNAS KFTPEGGCVS IAARVITVGD
GSPPPPGLPP SHAPGQWLLL SVTDNGIGIP ATDLSRIFER FYKVDRARTR NAGGTGLGLA
IAKHLVEGHG GRIWATSIEG EGSTFYLTLP VA
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