| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3804 |
|---|
| Symbol | |
|---|
| ID | 5210786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4758847 |
|---|
| End bp | 4759428 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640597400 |
|---|
| Product | thymidine kinase |
|---|
| Protein accession | YP_001278108 |
|---|
| Protein GI | 148657903 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1435] Thymidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCC TGTTGGGGGG CCGCATTGAG GTGATCTGCG GCTGTATGTT CAGCGGTAAG
ACCGAAGAAC TGATCCGCCG TCTCAACCAT GTCCGGCTTG CACGTCAGCG CCTGATCGCC
TTTACGCCAC GCCGCGATAC GCGCTACCGG CTCGGCAGCC TGGTGAGTCA CAATGGTCTC
TCGGTCGAAG CGCGCGTGAT CGACTCGATC CGCGATATTC CGGCGTACCT TGATAGCGAT
GTCGATGTGG TGGCGGTCGA TGAACTGCAC CTGCTCGATG ATCCGCCCGA TGCGGCGCGC
GAGGTCTGCC AGCAACTGGC AGACCGTGGC TTGCGGGTCA TCGTCGCCGG GCTGGATCAG
GACTTTCGCG CGCAGCCGTT CCCGGCAATG GCACAGTTGA TGGCAGTGGC TGAACAGGTC
GACAAGTTGT ACGCAATCTG CGTGCGGTGC GGCGCCTATG CGACCCGTTC CCAACGCCTG
ATCGACGGCA AACCGGCGCC TGCCGACGCG CCGACGATTG TTGTCGGCGG GCAGGAACTG
TACGAAGCGC GCTGCCGTGC CTGCTACGAA CCGGCACAGT AA
|
|---|
| Protein sequence | MTRLLGGRIE VICGCMFSGK TEELIRRLNH VRLARQRLIA FTPRRDTRYR LGSLVSHNGL
SVEARVIDSI RDIPAYLDSD VDVVAVDELH LLDDPPDAAR EVCQQLADRG LRVIVAGLDQ
DFRAQPFPAM AQLMAVAEQV DKLYAICVRC GAYATRSQRL IDGKPAPADA PTIVVGGQEL
YEARCRACYE PAQ
|
|---|
| |