| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3788 |
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| Symbol | |
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| ID | 5210770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4738511 |
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| End bp | 4739917 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597384 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_001278092 |
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| Protein GI | 148657887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0893617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.326281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATC ACATTATTGG CATTGCTGGC GCGGGAATGA GCGCAATCGC GCATATCCTT
CTGGATCAGG GGCACACGGT CAGCGGGTCG GATGTGCAGC GCAACGCGCT CACCGAAGCA
CTCGAACAAC GCGGCGCGCT GATCCACGAT GGGCACGACC CCGCCTGGAT CGCAGGCGCC
GATGCGCTCG TGGCAACCTC CGCCGTGCGG GATGATCACG TCGAACTGTC AGCGGCGCGT
GCGCGCGGCA TCCCGGTGCT GCGACGCGCC GACCTGTGGC GCGAGTGGTC GCAGCAGCGG
CGCGTGGTGG CAGTCGCCGG CACGCACGGG AAAACCACAA CAACGGCGCT GATTGCGCTG
ATGTTGACGC AGGCGGGCGG CAATCCCGGT TTTCTGATCG GCGGGGAGAC GCCCGATCTC
GGCATACACG CGCGGTGGGG CGATCCGGCA GCGCCGCTCG TGGTCGAAGC CGATGAGTAC
GACCGAACGT TTCTGGCGCT GACGCCAGAT GTGGCGGTGA TGACCAATGT CGAATGGGAT
CACGTCGATA TCTATCCATC ACCCGACAAT TACGAAGCGG CATTTCGTTT ATTTACCAGA
CGTGTGGCGC AGCCGCAGCG CCTGATCGTG TGTGGCGATG ATCCGGGCGC GTTGCGTGTC
GCCAATCACC CTGATGCGCA GCAGTATGGC ATTGAAGAAG CGATTGCCCG CAACCCGGCT
TCGTGTCGCC TGGCGCCAAT GGACTGGATG GCGGCGAATG TGCGCTACGA CGGAGCGATG
ACCAATTTCG ATCTCTGGCG GTATGACCGG CGCACGTTTG GCGCCCGGCT CGACGGCACA
TATACCATGC GCCTGGTCGG TGATCACAAT GTGCGCAACG CACTGGCAGC AATTGCAGTC
GCAACCCTTC TGGGGGTTGA GCGTGACGCA ATTGCGGATG CGCTTGCCGC CTATCGTGGA
GCACGTCGGC GTTTCGACAT CAAAGGCGAG GCGAACGGTA TCACGATCAT CGACGACTAC
GCGCATCATC CGACAGAAGC GCGTGCAACC CTGGCAGCGG CGCGAGCGCG TTTTCCACAA
CGCCGGCTCG TCGTCTATCT GCAACCGCAT ACCTTCTCGC GCACACAGGC GTTACGTGAT
GCCTGGGCAG ATGCATTCGA TCACGCAGAT GTCGTGCGGA TCGGCGATGT GTACCCGGCG
CGCGAGACCG GAGATCCGCG CACTGTTGCC CATGCGCTTG CCGGATGCAT CAGGCACAAC
GATGTTCAGG CAGTGGGGAA TGTCGTCGAG GCAGCGGCAA CCATTGGCGG GCTCTTGCGT
CCCGGAGACG TGCTGCTGAC CCTGGGCGCC GGCGATGGGT ATCGCGTGGG AGAATTGATC
ATCGACACTC TTCGACAGCA GAATTGA
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| Protein sequence | MHYHIIGIAG AGMSAIAHIL LDQGHTVSGS DVQRNALTEA LEQRGALIHD GHDPAWIAGA
DALVATSAVR DDHVELSAAR ARGIPVLRRA DLWREWSQQR RVVAVAGTHG KTTTTALIAL
MLTQAGGNPG FLIGGETPDL GIHARWGDPA APLVVEADEY DRTFLALTPD VAVMTNVEWD
HVDIYPSPDN YEAAFRLFTR RVAQPQRLIV CGDDPGALRV ANHPDAQQYG IEEAIARNPA
SCRLAPMDWM AANVRYDGAM TNFDLWRYDR RTFGARLDGT YTMRLVGDHN VRNALAAIAV
ATLLGVERDA IADALAAYRG ARRRFDIKGE ANGITIIDDY AHHPTEARAT LAAARARFPQ
RRLVVYLQPH TFSRTQALRD AWADAFDHAD VVRIGDVYPA RETGDPRTVA HALAGCIRHN
DVQAVGNVVE AAATIGGLLR PGDVLLTLGA GDGYRVGELI IDTLRQQN
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