| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3704 |
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| Symbol | |
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| ID | 5210683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4631878 |
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| End bp | 4633602 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597297 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001278008 |
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| Protein GI | 148657803 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0303465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TCCGGTTCGC TGATGAAGGA AGAACCGTCG AGACCGACCG TACCGGACAC
GATGTACTCA ACACGCCGGT GCTGAACAAG GGCAGCGCCT GGAGCGAAGA AGAGCGCATC
GGGCTTGGTC TGCTGGGGCT GCTGCCGTAC CACATCTCGA CTATCGACGA GCAACTGGCG
CGTGTCTACC GCAACTACCA GCAGCGCACC AACGACCTGG ATCGGTACCT CTACCTGACC
GATCTGCAAG ACCGGAATGA GACGCTCTTC TACCGCCTGC TGCTTGAGCA TATCACCGAA
ATGATGCCGA TCATCTACAC GCCAGAAGTC GGCGTCGCCT GCCAGCGCTA CAGTCACCTG
TTCCACCGCC CGCGCGGTCT GTTCATCAGC TATCCGCACC GCGATCAGAT CGAAACGATG
CTGCGCGCCT GGCCCTTCGC CGATCAGGTG CGCGTGATTG TGGTCACCGA CGGTGAGCGC
ATCCTGGGCC TCGGCGACCA GGGAATGGGC GGCATCGGCA TTCCAATCGG CAAGTTGACG
CTCTACTCAC TCTGCGCCGG AATCCATCCG GCAACCACAC TCCCGATCGT GCTCGATGTC
GGCACCAACA ACCCCGCGCT GCTCAACGAC CCGCTCTACC TGGGGTGGCG TCATGAGCGG
GTGCGCGGCA GAGAGTACGA CGACTTTATC GAGCAGTTCG TCACAGCAGT GGAGAAGGTT
TTCCCGCACG CATTGCTGCA ATGGGAAGAT TTCGCCAAGG ATAACGCGCG CAACCTGCTC
GACCGCTACC GCGACCGGAT TCTCAGTTTC AACGACGACA TTCAGGGCAC CGGTGCGGTG
ACACTGGCAG GGTGGCTTGC TGCAGTTGAG ATCTCCGGCG TGCCGCTGGC GGATCAGCGC
ATTGTCATGC TGGGCGCAGG TTCGGCAGCG ACCGGCATTG CTGAACAGAT CGTGGCCGTC
ATGGTCGAAG CGGGCATCCC GCTCGAACAG GCGCGGCGGA CGATCTGGCT GATCGACAGC
CGCGATCTGG TTCACACCCG GCGTACCGGT CTCGAAGCGG TGAAAATGCT CTACGCCCAA
CCCTACGAGA TGCTGGAGGG GTGGACGCGC GAAGGGAGCG AAGCATTCAC CCTGTATGAT
GTTGTTTCAA ATGTACGTCC GACGTGTCTG ATCGGCACAT CGGCGCAACC CGGCGCATTC
GACGAGCGCA CCATCCGTGA GATGGCGCGG CATGTCGAGC GTCCGGTCAT CTTCCCGCTC
TCCAACCCCA CCTCAAAGAG CGAGGCTGTT CCGGCTGACC TGATCGCGTG GACGGAGGGA
CGCGCACTGG TTGCGACCGG CAGCCCCTTC GAGCCAGTGA CCTACGGCGG TCGCACCTTC
ACGATCGGGC AATGCAACAA CGTCTTTATC TTCCCCGGCG TCGGGCTGGG TGTCATCGCC
GTTGGCGCGA AGCGCGTCAC CGACGCAATG TTCATCGCCG CCGCGCGCGC ACTCAGCGCC
TTCTCACCGG CGCGCCAGGA CCCGACGGCG TCACTCTACC CATCGCTCAC CCAGGTGCGC
GACGTTTCAC GCGCCGTGGC GCAGGCAGTC GCTGCCGAGG CCGTGCGCTC CGGGCTGGCG
GCGCCGCTCA GCGCCGAAGA GCAGACCGCG CGCATCAACG CAACAATGTG GACGCCGGCG
TATCCGCAGG TGCGGCGAAT GGAAGAGCAC ACCGTGCATC ATTGA
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| Protein sequence | MIRIRFADEG RTVETDRTGH DVLNTPVLNK GSAWSEEERI GLGLLGLLPY HISTIDEQLA
RVYRNYQQRT NDLDRYLYLT DLQDRNETLF YRLLLEHITE MMPIIYTPEV GVACQRYSHL
FHRPRGLFIS YPHRDQIETM LRAWPFADQV RVIVVTDGER ILGLGDQGMG GIGIPIGKLT
LYSLCAGIHP ATTLPIVLDV GTNNPALLND PLYLGWRHER VRGREYDDFI EQFVTAVEKV
FPHALLQWED FAKDNARNLL DRYRDRILSF NDDIQGTGAV TLAGWLAAVE ISGVPLADQR
IVMLGAGSAA TGIAEQIVAV MVEAGIPLEQ ARRTIWLIDS RDLVHTRRTG LEAVKMLYAQ
PYEMLEGWTR EGSEAFTLYD VVSNVRPTCL IGTSAQPGAF DERTIREMAR HVERPVIFPL
SNPTSKSEAV PADLIAWTEG RALVATGSPF EPVTYGGRTF TIGQCNNVFI FPGVGLGVIA
VGAKRVTDAM FIAAARALSA FSPARQDPTA SLYPSLTQVR DVSRAVAQAV AAEAVRSGLA
APLSAEEQTA RINATMWTPA YPQVRRMEEH TVHH
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