Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3696 |
Symbol | |
ID | 5210675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4622343 |
End bp | 4623248 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640597290 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001278001 |
Protein GI | 148657796 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.657474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0341375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATG TCGTTACCCT CGGCGAGTGC ATGGCTGTTC TGTACCCGCC CGATCCTGTC TCGCTGGACG AAGCCCGCAC CCTGCTGATC GACATCGGCG GCGCGGAGGC GAACCTTGCC ATCGCGCTCT GCCGACTCGG TCACAGCGCG CGTTTCATCA GTCGGGTCGG CGATGATCCG TTTGGGAGGC GGGTGCGCGC TGTGCTATCT ACCGAGGGAG TCGATACATC CGCGCTTCTG ATCGATCCCG AAGCGCCAAC CGGGGTCTTC TTCCGCGAAT GGCTCGCCGA TGGCGCGCGA CGTGTCTACT ATTATCGCCG CAACTCAGCC GCGAGTCGAA TCACGCCGGA CGATCTCACG CCAGCACAGT TCAACGGCGC GCGCATTGTT CACCTGACCG GCATCACGCC TGCGCTGAGC GCGTCCTGCG CTGCCGCCTG CGAGCGCGCG ATTGAACTGG CGCGCGCTGC CGGTGCGCTG ATCTCCTTCG ACCCCAATTT CCGTCCACGA TTATGGAGCG CATCACAGGC GCGCGATACG CTCCTGCCGT TGATGCGCGC CGCCGATATC CTGTTGATCG GGCATGAAGA TGCGCAGGCG CTCCTGGAAG TTGACAACGA CGACGACGCG CTGATGGCGG CGGCAGCGCT GGGTGCACAG GTCGTGGTGC TGAAATGCGC CGAACGCGGC GCACGTGCGC TGGCGAACGG GCAGCACGTC ACGACGCCAG CTTACCCGGT CCGCCAGGTG GTTGATCCGG TCGGCGCTGG TGACGGCTTC GATGCCGGTT TTCTTGCGGG ATGGCTGCGC GGATGGAGTA TGTCCGATTC GCTGGCGCTC GGAGCGCGCA TCGGCGCGGC TGCGGTCGAA ACATTGGGCG ATTACGTCGG ATATCCGCGC GTCTGA
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Protein sequence | MSDVVTLGEC MAVLYPPDPV SLDEARTLLI DIGGAEANLA IALCRLGHSA RFISRVGDDP FGRRVRAVLS TEGVDTSALL IDPEAPTGVF FREWLADGAR RVYYYRRNSA ASRITPDDLT PAQFNGARIV HLTGITPALS ASCAAACERA IELARAAGAL ISFDPNFRPR LWSASQARDT LLPLMRAADI LLIGHEDAQA LLEVDNDDDA LMAAAALGAQ VVVLKCAERG ARALANGQHV TTPAYPVRQV VDPVGAGDGF DAGFLAGWLR GWSMSDSLAL GARIGAAAVE TLGDYVGYPR V
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