| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3692 |
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| Symbol | |
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| ID | 5210671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4618504 |
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| End bp | 4619634 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597286 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001277997 |
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| Protein GI | 148657792 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0136998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTT CGACGCTCAT TCCCGAATTG ACCAAAGGTC TGGCGAACTT CACCCCCGGC
AACCTGGTGA TGATCGCCGT TGCGGCAACG CTGATCGCCC TGGCGGTGGT GAAGCAGTAC
GAGCCGGTGT TGCTGCTGCC GATCGGCTTT GGTTGCCTGG TAGCGAACAT TCCGTTGACC
GGCATGACCG ACGGCGAAGG GTTGTTTGGC ATCCTCTACC GCGCCGGGAT CAGCACCGAA
CTGTTTCCGT TGCTGATCTT CGTTGGCGTT GGAGCGATGA TCGATTTCAG CCCGTTGCTG
GCGATGCCGC GCATGGCGCT GCTCGGCGCC GCCGGTCAGT TTGGCATCTT CGGCACGTTG
ATCCTGGCGA TGCTCCTCGG CTTCCCGCTG AATCAGGCGG CTTCGATCGG GGTCATCGGC
GCTATCGACG GACCCACATC GATCTATGTC GCTTCGCAAC TCGCGCCCGA ACTGCTAGCG
CCGATCGCGG TCGCCGCTTA CTCATACATG AGCCTGGTGC CGATCATTCA ACCGCCGCTG
ATGCGGTTGC TGACGTCGCG CCGCGAGCGG ATCATCCGCA TGGCATACGC ACCGCGTCCG
GTGTCGCGGC GGGCGCTGGT GCTGTTCCCA ATCGTCGTGA CTCTGACTAT CGGGATGCTG
GTGCCGGCGG CGACGCCGCT GATCAGTATG CTGATGCTGG GCAACCTGCT GCGTGAGAGT
GGCGTGGTGG ATCGGTTGAG CAAAGCGGCG CAGAACGAGA TCATTAATAT TGCCACCCTG
TTCCTCGGAT TGACCATTGG CTCGACGATG AGCGCCGATT CGTTTCTGAA CCTGGTGACG
CTGCAAGTGC TCGGATTGGG GTTGCTGGCG TTCATTCTGG ACACCGTCGC CGGGCTGCTG
TTCGGCAAGT TCCTGGCGCT GGTCAGCGGC GGGGCGATCA ACCCGCTGAT CGGTGCAGCC
GGCATCTCCG CCTTCCCGAT GGCAGGTCGT CTGGCAGCAA AAGTGGCGCT CGACGAAGAT
GCCGACAATT TCATTCTGAT GCACGCGATG GGTGCCAACA CCGCCGGGCA ACTGGGCAGC
GTCGTCGCTG GCGGCGTGTT GCTGGCGCTG GTGACAGGGG TGCTGGGGTG A
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| Protein sequence | MDFSTLIPEL TKGLANFTPG NLVMIAVAAT LIALAVVKQY EPVLLLPIGF GCLVANIPLT
GMTDGEGLFG ILYRAGISTE LFPLLIFVGV GAMIDFSPLL AMPRMALLGA AGQFGIFGTL
ILAMLLGFPL NQAASIGVIG AIDGPTSIYV ASQLAPELLA PIAVAAYSYM SLVPIIQPPL
MRLLTSRRER IIRMAYAPRP VSRRALVLFP IVVTLTIGML VPAATPLISM LMLGNLLRES
GVVDRLSKAA QNEIINIATL FLGLTIGSTM SADSFLNLVT LQVLGLGLLA FILDTVAGLL
FGKFLALVSG GAINPLIGAA GISAFPMAGR LAAKVALDED ADNFILMHAM GANTAGQLGS
VVAGGVLLAL VTGVLG
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