Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3677 |
Symbol | |
ID | 5210656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4606782 |
End bp | 4607285 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597271 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001277982 |
Protein GI | 148657777 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00974896 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAATAG AGCAAAAAGC GGGCGATATG GGAATCGTCA CTGCATCGCT CGAACAGCTG GTCAACTGGA GCCGATCGAG CGCGATGTGG CCCCTGCTGT TTGGTCTGGC GTGCTGCGCC ATCGAGATGA TGGGCGCGCA GGGCGCCAAT TACGACCTGT CGCGTTTCGG GATGGAGATC AACCGGGCAT CACCGCGTCA GGCGGATCTC ATGATCGTCG CCGGGCGCGT CTCGCGGAAA ATGGCGCCGG TCGTGCGCCG CCTGTACGAT CAGATGGCAG ACCCGAAATG GGTGATCGCC ATGGGAGATT GTGCGGCGTG CGGCGGGGTG TTCAACAATT ACGCGATCGT GCAGGGTGTC GATGAAATCG TTCCGGTCGA TGTCTACGTC GCCGGGTGCC CGCCGCGTCC CGAAGCGCTG ATCGATGGCA TTATCCATCT GCACGAGAAG GTGAAGCGCA TGCGTCTCGA TGGCGAATTG CGCGAGCCGG TTCGCCTCTC GTAG
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Protein sequence | MGIEQKAGDM GIVTASLEQL VNWSRSSAMW PLLFGLACCA IEMMGAQGAN YDLSRFGMEI NRASPRQADL MIVAGRVSRK MAPVVRRLYD QMADPKWVIA MGDCAACGGV FNNYAIVQGV DEIVPVDVYV AGCPPRPEAL IDGIIHLHEK VKRMRLDGEL REPVRLS
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