Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3649 |
Symbol | |
ID | 5210627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4563920 |
End bp | 4565914 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597242 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001277954 |
Protein GI | 148657749 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGGGA TTGTGGGTAT CGTCAATATC CAGGGTGATC AACCGATCCA CGAAGAGACG CTCCGCCGGA TGCTGGCAAT GATCCGGCAC CGCGGACCCG ATCAGTTTGG CATCTATCTC GACGATCAGG CTGGTCTGGG CAATGCGCGT TTGAGCATTA TCGATCTGCA CGGCGGTCAA CAACCGATTG CCAATGAAGA CGAAACGCTC TGGATCGTCT TCAACGGTGA GATTTTCAAC TATGTGGAAC TGCGCTCCGA CCTGGAAGCG CGTGGACATC GCTTCACCAC CAGTACCGAC ACCGAGGTGA TCCTGCACCT GTACGAAGAT CATGGACCGG CGTGTCTCTC CCTGCTCAAC GGTCAATTCG CCATCGCTCT CTGGGATGCG CGTGAACAGA CACTCTTCCT GGCGCGTGAT CGGGTTGGCA TTCTGCCGTT GTTCTACACT ATCGTCGATG GCGCACTGAT CTTCGGTTCC GAAATAAAAG CAATCCTGGC GGATCCGCGC GTGCCGCGAG CGATCGATCC GGTGGCGCTG GAGCAGATTT TCACCTTCTG GAGCACCCTC TCGCCACGAA CGATCTTTCG CAACATTGTC GATCTTCCGC CCGGACACTA TCTGATCGCG CGCCAGGGAC AGATCGACAT CCGACCCTAC TGGCGTCTCG ATTTCGGTCT GCCGGTGCGT GAGCGCAGTG AAGATGAATA TATCGAGGAA TTGCGCGAAC TGCTGATCGA TGCAACGCGG ATCCGCCTGC GGGCTGATGT GCCGGTTGGC GCGTACCTGA GCGGCGGACT CGACTCCTCG ACGGTGGCGG CAATCGTGCG CAGCGCCGCC GGAGTTCAGC TCGACACCTT TTCGATTGCG TTCAGCGATC CCGAATTCGA CGAGAGTTCT TTTCAGCGCC AGATGGCGCA ATTCCTCGGA ACCGACCATC AGGTGGCGTT TGTCACCCAT GCCGACATCG GGCGCGTCTT CCCGGAGGTG ATCTGGCATA CTGAAACGCC AATCCTGCGC ACCTCACCCG CGCCGCTCTT CCTCCTCTCG CAGCTGGTGC GCGACCGGAA CTATCGTGTG GTGCTGACCG GTGAAGGCGC CGACGAATTC CTGGCAGGGT ACGACATTTT CAAGGAAGCG AAAGTGCGAC GCTTCTGGGC GCGTCAACCG ACATCGCGCC TGCGACCGCT CCTGTTTCGC CGGCTCTATC CATGGATCGC CGGGTTTGCC AGCAGCAACA CAGCCTATCT GTCGGCATTT TTTAGCGAAG GATTGATGGA TACGCAGGCG CCGGACTATT CCCATCGTCC ACGCTGGCGC ACCACCAGTC GGATCCGACG ATTCTTCAGC GACGAGGTGC GTCAGGCTGC CGATGCACTG GCGCAGCCGG AGGATCGCGC ACCGTTCTAC CCGGAAGCGT TCAGCACGTG GGATCCATTG CAGCAGGCGC AGTACCTGGA AATCACCACC TTTCTCTCGC AGTACCTGCT CGCAGCCCAG GGCGATCGGA TGCTCATGGC GCACGCCGTC GAGGGGCGCT TCCCCTTCCT CGATCATCGG GTGATCGAGT TTGCCAGCCG ACTGCCGTCA CGTCTGAAAC TGCGCGGTCT GACCGAAAAG TACATTCTGC GCCAGGTCAG CCGTCGCTGG CTCCCGGACG CGATCTGGCA GCGCGCGAAG CAACCGTATC GCGCGCCGAT CCACCGGAGT TTCTTCAACG ATGCGCGTCC GGGCTATGTC GATCATCTGC TCGCGCCGGA ATACATCCAG GCGACGGGTC TGTTCCGCCC CATGGCTGTT GCGCATTTGA GGAAGAAAGC GCTCTCCGGG GTGCGTCTGA GCGAAACCGA GGATATGGCG CTGGTGGGGA TTCTCTCGAC ACACCTGCTG GTTGAGCAGT TCATTCGTGA CATGCGTATG CCGCAGCCGC TCTCGGATGC GGATGATGTC AGGGTGTGCA TACGAAGCGG CGTGGCAGCA GGAGGAGACC GATGA
|
Protein sequence | MCGIVGIVNI QGDQPIHEET LRRMLAMIRH RGPDQFGIYL DDQAGLGNAR LSIIDLHGGQ QPIANEDETL WIVFNGEIFN YVELRSDLEA RGHRFTTSTD TEVILHLYED HGPACLSLLN GQFAIALWDA REQTLFLARD RVGILPLFYT IVDGALIFGS EIKAILADPR VPRAIDPVAL EQIFTFWSTL SPRTIFRNIV DLPPGHYLIA RQGQIDIRPY WRLDFGLPVR ERSEDEYIEE LRELLIDATR IRLRADVPVG AYLSGGLDSS TVAAIVRSAA GVQLDTFSIA FSDPEFDESS FQRQMAQFLG TDHQVAFVTH ADIGRVFPEV IWHTETPILR TSPAPLFLLS QLVRDRNYRV VLTGEGADEF LAGYDIFKEA KVRRFWARQP TSRLRPLLFR RLYPWIAGFA SSNTAYLSAF FSEGLMDTQA PDYSHRPRWR TTSRIRRFFS DEVRQAADAL AQPEDRAPFY PEAFSTWDPL QQAQYLEITT FLSQYLLAAQ GDRMLMAHAV EGRFPFLDHR VIEFASRLPS RLKLRGLTEK YILRQVSRRW LPDAIWQRAK QPYRAPIHRS FFNDARPGYV DHLLAPEYIQ ATGLFRPMAV AHLRKKALSG VRLSETEDMA LVGILSTHLL VEQFIRDMRM PQPLSDADDV RVCIRSGVAA GGDR
|
| |