| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3630 |
|---|
| Symbol | |
|---|
| ID | 5210608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4537134 |
|---|
| End bp | 4539956 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640597223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277935 |
|---|
| Protein GI | 148657730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT TTCTCACCAT CAAACAGCAC TCGCTGGCGT TGACCGTCGG AGCGCTCATC
ACGGCGCTGG TTATCGCAAC GCTTCCCTTG CCCGCAAGCG TTCAGGCAGC TGGCGTCATC
AGTGGCGCTG TCTTCCGCGA TTTCGACGGC GATGGCGTGC GTGACGCAAA TGAGCCTGGG
GTCGGTGGCA TCACGGTCAC CGCCTATGAC CCATCCGGCG CAAGTGCAGG CGTGGCTGTC
AGTTTCGCCA CGCTGTGTCT CGGTTCCGGG AATCCGATCC CGGAATGTAC GGCGCTCAAT
GCGCCTGCGA TCGGCAGTTA TACCCTCAAT GCCACCGGTG TGGGACCATA CCGCATCGAG
TTTAGCGGGT GGCCCTCCCA TATGCGCCCG GCAGCGCAGG GTGGCGGTAA CAACACGAGT
GTGCAATTCG TGCCGGACGG CAACTCTTCG AATATCGACT TCGCGCTCCA CAATCCGGCA
GAGTACTGCC AGCAAGACCC GGATCTGGTC ACCAGTTGCT ACACTAACGG CGATCCGCAG
GGTGGCGGTT CCACCGCTAC GCGATCGGCA ATCGTGCAGG TGCCCTTCAC GCCAGCAACC
ACCGGTCCGG ATGAGAACGT GTATCTGGCA ACCGGTCAGC AGGTTGGCGC TACGTGGGGG
CTTGCCTACC AGCGTTCCAG TCGGACGTTG CTGGCATCGG CGGTTGTGAA ACGTCACACC
GGCTTTGGTG CGGGCGGGAT CGGCGCTATC TATCGCATTG ATCGCGATCG CGTCACCGCC
CCCAGCGTGT TGATCGATCT GAATGCCGCA GGATACCCGC CTGGCGTCGC GGTTGGCACC
AGTCCGCGCG CTCCCGGCGA TCTGAGCATC AACGAAGGTG ATCCCAACCG CGACCCGGCA
GTGTTTGATG CAGTCGGCAA AATCGGGATT GGCGGCATTT CGCTCTCGGA GGATGAAGAG
ACCCTCTGGG TCGTCAATCT GACCGCGCGC ACCCTGCTGG AGATCCGCAT CGGCGTTCCG
CCGGTTACAC CAACTGCGGC GGACATCACC GTCCATCCCC TGCCGACACC TGCCTGCCGC
AATGGGGAGT TCCGCCCCTG GGCAGTGAAG ACGTATGCCG GGCAGGTCTA TGTCGGCGGC
GTCTGTTCAG GCGAACGACC CTATGCGGGA AAAAATGTCG ATTCGAGCGA TCTGACGGCG
CATATCTATC GCCACGATCC GACCGGCGCG GTCGGTAATT TCACCGAAGT CTTTTCGTTC
CCGCTCAATT ACCCGCGCGG TCGCATCTCG AACGGCGGCG TCGGCAATCG GCCATCAGCT
GCGTGGTTGC CCTGGATCGA CGAGTGGAGC GACATCGGTC CGCCTATGCC GTTGCCTGGC
GACGGTCCAT TCGGGCAGAC GATGTACCCG CAACCGATGC TCACGTCGAT CGACTTCGAC
GTTGACGGCG CCATCATCGT GGCGCTCAAC GACCGTGCGG GCATGCAGTT GGGCAATCGC
AACTACAGCC CCATCGCCGC CGATACAAAC GAGTATGCTG GCGTTGCCGC CGGCGATCTG
TTGCGCGTCT GTGTTAATCC AGCGACTCCC ACCGGTTACA GCCTTGAAAA CGCTGGCGTG
TGTCCCGGCG GTCTCGTCGG CGGTTCGACC GGCAACCGAC AGGGACCGGG CAACGGCGAG
TTCTACAGCC GCGACGAGTA TGGCTCAGCC CACGATGAAG TGACGATTGG CGGCATGGCG
TTGTACTATA GTCAACGGCA GATTATTGTC ACGGCCTACG ACGCGCTGCC AGCAGACCAG
AACGGTCCGG TTCGCTCTGG CGGTTTGCGC TGGTTCAACG CCGCCAACGG CGCGCTGACC
GATGCCTACG TCATCTTTGG GCGGGATCAA CCGATTGGCT CGCCGCCGGG AACAGAAGTG
CGACGCGCGA CCTTCGGGAA ATCCGCCGGG CTTGGCGATC TCGAAACGTT TTGCAATCAG
GCGCCGCTCG AAATTGGCAA CCGTGTCTGG CTCGACAGAA ATCGGAACGG CGTGCAGGAC
CCGGACGAAC CGCCGATCCC TGGGGTAACG GTCGAACTGT GGCGCAACGG CGTGCGCATT
GGCGTTGCCG TGACCGACGC CGCAGGAACG TACTACTTCC GCAGCGGAAC GAACAGCACG
GATGACAACC TGCAGGACAA CATCATCCAC GATGGCGGCA TCGGCATTCG CCCCCGCACC
GGAACGCCGG GAGGCGCGTC GGAGTATGAG GTTCGCATTC CCAACATCAC CGGTCCGAAC
CGCCAACCGG CACTGACCAA CCTGACCCTG ACCGTCAACG ACAATGATAG CAGTCCCAAT
GGCGATAGCC GCGACTCAGA TGGCGAGACG GTCGGCAACA ACGCAGTCTT CGTCATTCCC
TACAACAACC ACGCCGCAGC CGGGACGAAC AATCACACCT ACGACTTTGG CTTCTTCGAG
GGTGTTCCAA CCGCGATTGC GCTCATGTCT TTCACCGCCG GTTGGGAAGG CGATGCAGTG
ATGATCCGCT GGGTCACAGC AATGGAACTC GATACCGCCG GATTCCGCCT GCTGCGCAGC
GCCACGGGGC GGATCGACGA CGCGATCATC GTCACGCCGA CGCTCATCCG CGCGCGCGGC
GGACCCGGCT ACGGCGCGAC GTATGAATGG CGCGACACGA CAGCACAACC AGGCGCTGCG
TATACGTATT GGCTAGAGGA GGTCGAAACC ACCGGGCGCG TCAACCGGTA CGGACCGGCA
ATGGCGCGGG TGCAGACGAC ATCGCCGCCG TATCTGGTGA CGCTGCCGCT GGTAATCCGG
TAA
|
|---|
| Protein sequence | MKLFLTIKQH SLALTVGALI TALVIATLPL PASVQAAGVI SGAVFRDFDG DGVRDANEPG
VGGITVTAYD PSGASAGVAV SFATLCLGSG NPIPECTALN APAIGSYTLN ATGVGPYRIE
FSGWPSHMRP AAQGGGNNTS VQFVPDGNSS NIDFALHNPA EYCQQDPDLV TSCYTNGDPQ
GGGSTATRSA IVQVPFTPAT TGPDENVYLA TGQQVGATWG LAYQRSSRTL LASAVVKRHT
GFGAGGIGAI YRIDRDRVTA PSVLIDLNAA GYPPGVAVGT SPRAPGDLSI NEGDPNRDPA
VFDAVGKIGI GGISLSEDEE TLWVVNLTAR TLLEIRIGVP PVTPTAADIT VHPLPTPACR
NGEFRPWAVK TYAGQVYVGG VCSGERPYAG KNVDSSDLTA HIYRHDPTGA VGNFTEVFSF
PLNYPRGRIS NGGVGNRPSA AWLPWIDEWS DIGPPMPLPG DGPFGQTMYP QPMLTSIDFD
VDGAIIVALN DRAGMQLGNR NYSPIAADTN EYAGVAAGDL LRVCVNPATP TGYSLENAGV
CPGGLVGGST GNRQGPGNGE FYSRDEYGSA HDEVTIGGMA LYYSQRQIIV TAYDALPADQ
NGPVRSGGLR WFNAANGALT DAYVIFGRDQ PIGSPPGTEV RRATFGKSAG LGDLETFCNQ
APLEIGNRVW LDRNRNGVQD PDEPPIPGVT VELWRNGVRI GVAVTDAAGT YYFRSGTNST
DDNLQDNIIH DGGIGIRPRT GTPGGASEYE VRIPNITGPN RQPALTNLTL TVNDNDSSPN
GDSRDSDGET VGNNAVFVIP YNNHAAAGTN NHTYDFGFFE GVPTAIALMS FTAGWEGDAV
MIRWVTAMEL DTAGFRLLRS ATGRIDDAII VTPTLIRARG GPGYGATYEW RDTTAQPGAA
YTYWLEEVET TGRVNRYGPA MARVQTTSPP YLVTLPLVIR
|
|---|
| |