Gene RoseRS_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3622 
Symbol 
ID5210600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4526277 
End bp4527545 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID640597215 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001277927 
Protein GI148657722 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCGGGCAACG CAGCGTGTGG ATGGTCGCCG TTATCGCTCT CCTCGGAGCG 
ATTGGCTATG TGGCATTGCG CCCGCCGTCG CAACCTTCCC CTGCGTCCAC GCCATATGCT
CCAACCGCCG TATCGAATGT GAACGTCCCC GTGGTTCCTG ATAATCCTTT CGCTCCCTCC
AATCCTGCAC GCATCACCCC TGACGGAGCA GGTGATTGGG CGATGGAAGG GTTGAACCCG
GCACGCACCC GCGCCGTTGA AACACCCATC GCGCCACCGC TCGATCAGCA ACGAGTGGTC
GTCGCCGCCT CGTTTGAAGA GGGAGTCTCC CCGCCAGTCA TTGCCCGTGG CTTGATACTG
CTGGAGACGA AAGACGCCCT GAGCGCCATC GATCTGCGCA CCGGGCGACA ACGCTGGGCG
TACCGGCAGA AAGGCGCCTA TATCTCGCCC GCCGTCGCTG GCGATACGGT GTACTTTCGC
GCGGAACAGG CAAATCAGGG GCAACTGGTA GCGCTGGAGT TGAGCAGCGG TCGGCAGCGC
TGGACATTCA CCCCCAAACG ATTGAGTTCT TCCACCAATA ATTATTTCGG TGGACACCTG
ACGTCACCGG TCGTCGTCGA TGGCGTCGTA TACGTTGGCG CTGGCAAAGA ACTCTATGCG
CTGGATGCGG TAACCGGCAA AGTACGCTGG GAGTTCAGCG CGCAGGATTT CGTCACCTCA
TCGGCTGCCG TAGCTGACGG GCGCGTATTC GTCTCCGATT TTTCCTATTT CTACGCGATT
GATCAACACA CTGGCGCTCT GATCTGGTCT TACCCGGCAT ACTCCGCTGT CTATTTCTCG
TCGGTGGCGA CGGGCGATAT GGTGTTGATC AGCAGTGGTC AGAGCATGAT TGCGCTCGAT
GCAGGTGATG GCGCAAAACG CTGGGAGAAG AATATTCCTG GCAAGGCGCT CATCCCGGCT
GGTGCACAGG GCGACATCGT ATTTGTCAAA ACGACGAATG AACTGTTTGC GCTGGATCGC
TCCAACGGAC GGGAGTTATG GTCGTTCCGG GATGTCAACT ATGTCTCTCT CCCTGCGCTG
ACACAGCAGT ACGTCTTTGT TGTCAACGGC ATGGGCGCCA GCGCAACCGT TGAGGCAATT
GACATCGCTA CCGGCGCCAG CGTCTGGTCG CAGCCGGTGC CACGACTGGC GACGACGGCG
CCGGTCATTG CGGGGCGCGC GATCTATGTG CGCACCACCG ATGGCAGAGT CATCGAACTG
CTGAGTTGA
 
Protein sequence
MSATGQRSVW MVAVIALLGA IGYVALRPPS QPSPASTPYA PTAVSNVNVP VVPDNPFAPS 
NPARITPDGA GDWAMEGLNP ARTRAVETPI APPLDQQRVV VAASFEEGVS PPVIARGLIL
LETKDALSAI DLRTGRQRWA YRQKGAYISP AVAGDTVYFR AEQANQGQLV ALELSSGRQR
WTFTPKRLSS STNNYFGGHL TSPVVVDGVV YVGAGKELYA LDAVTGKVRW EFSAQDFVTS
SAAVADGRVF VSDFSYFYAI DQHTGALIWS YPAYSAVYFS SVATGDMVLI SSGQSMIALD
AGDGAKRWEK NIPGKALIPA GAQGDIVFVK TTNELFALDR SNGRELWSFR DVNYVSLPAL
TQQYVFVVNG MGASATVEAI DIATGASVWS QPVPRLATTA PVIAGRAIYV RTTDGRVIEL
LS