| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3583 |
|---|
| Symbol | |
|---|
| ID | 5210561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4480442 |
|---|
| End bp | 4481668 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640597177 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001277889 |
|---|
| Protein GI | 148657684 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTCG GTATCGATTT TACGGCTGGC GTCTGGCAGG GGGCCGGCAT TGGGCGGTAC
ACACGCGAAC TGATCGGCGC CGTTCTTGCT CAGAGTCCTG ATCTTCGCTT CACGCTGTTC
TACGCCGCTG GCTTTCCAGG CGCTGATTCT CCGCCCTATC TGCCTGAGGT GCATCGCCTC
TGCGCCTCAC ATCCGCATAC CCGCGCCGTC CCGATCCCGC TGCCGCCGCG TCGCCTGACG
CAGATCTGGC ATCGGTTGCG CATTCCGCTG CCGATCGAAT GGCTGACCGG TCCGCTCGAT
ATTCTGCACG CGCCTGATTT CGTGCCGCCG CCAACCCGCG CTCGCACCCT CGTCACCATC
CACGATCTCT CGTACATGGT GCATCCCGAG TGCGCAGTTC CGGGAGTCGC CGCTTATCTG
CGCGATGCCG TGCCGCGCGC CTTGAAGCAA GCCAGTATCA TTATTGCCGA TTCGGAGTCG
ACCAGGCGCG ATCTGCATCG ACTGTTGAAC ATCGCCCTCG ACCGTGTGAC GGTGGTCTAT
CCAGGGGTCG ATGCGCGTTT CCGCCCGTTG CCGCCGGACG TATGCGAACC GGTGCGGTGT
CGGTTGAACC TGCCACGCCG TTTCATTCTG TTTGTAGGCA CCATCGAACC GCGGAAGAAC
CTCGTGCGGT TGCTGGAAGC GTTTGCCCGC ATCGACCCGA CGACGGGCGG GGAGGACCTC
TTCCTGGTAC TCGCCGGTCG CCGTGGATGG ATGTATCAAC CGGTGTTCGC GGCCATTGAC
CGGTTGAATT TACATGATCG TGTCCAACTG CTCGATTTTG TGGCGGATTC TGACCTGCCG
GTAGTGTATA ATCTTGCACA GGTATTCGTG TATCCCTCAC TGTACGAGGG GTTCGGCTTA
CCACCGCTCG AAGCGCTGGC GTGCGGTACG CCGGTGGTGA CATCTGACAA TTCGAGTCTC
CCGGAGGTGG TGGGCAATGC CGCTCTCCTG GCGCGCGCCG ATGATGTGGA GGCGCTTTCG
GAGGGGATGA TCCGCCTGTT GAAAGACGTG GCGCTGCGGG ATCGGTTGCG TCAGGCGGGT
CTGGAACAGG TGCGACGGTT TCGTTGGGAA GCGTCTGCCC GACAGATTAT CGAACACTAT
CATACGTTGT CAACGGGAGC ATCGCATGAG GCAACAACCG GAGCTCTCCG GCGAAGCGCT
CGACTCCGAC GAGATGGAGA GCCGTAG
|
|---|
| Protein sequence | MHVGIDFTAG VWQGAGIGRY TRELIGAVLA QSPDLRFTLF YAAGFPGADS PPYLPEVHRL
CASHPHTRAV PIPLPPRRLT QIWHRLRIPL PIEWLTGPLD ILHAPDFVPP PTRARTLVTI
HDLSYMVHPE CAVPGVAAYL RDAVPRALKQ ASIIIADSES TRRDLHRLLN IALDRVTVVY
PGVDARFRPL PPDVCEPVRC RLNLPRRFIL FVGTIEPRKN LVRLLEAFAR IDPTTGGEDL
FLVLAGRRGW MYQPVFAAID RLNLHDRVQL LDFVADSDLP VVYNLAQVFV YPSLYEGFGL
PPLEALACGT PVVTSDNSSL PEVVGNAALL ARADDVEALS EGMIRLLKDV ALRDRLRQAG
LEQVRRFRWE ASARQIIEHY HTLSTGASHE ATTGALRRSA RLRRDGEP
|
|---|
| |