Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3581 |
Symbol | |
ID | 5210559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4478345 |
End bp | 4479298 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597175 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001277887 |
Protein GI | 148657682 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATACC TCATTACAGG CGGCGCCGGC TTCATCGGCA GCCATCTGAG CGATGCGCTG CTGGCGCGTG GCGATCAGGT GGTGTGCATC GACAACTTTA ACGACTATTA CGATCCGGCG CGAAAGCGGC GCAATATCGC CCGCGCGCTG ACGAACCCCG GCTATACGCT GGTCGAAGCG GATTTCCGCG ATGCAGACGC GATGGATCGT ATCTTTGCGC ACTACCGACC GCAACGTGTG GCGCATATTG GCGCGATGGC GGGTCCGCGC CCCTCGATGC AGAATCCTGC GCTCTACGAA GATGTCAATG TGCGTGGGAC GCTGATCGTG CTGGAGACGG CAGCGCGCTA TCAGGTTGAT GGTCTGGTGC TGGCATCGAC ATCCTCGGTC TACGGTCTAT CGCCGACGCC ATGGTCGGAA GAGTCGCCGA CCGACCGCCC GTTGTCGTTC TATGCCGCCA CCAAGAAGGC GGCGGAAGTG CTGGCATACA CAGCGCACCG GCGCCACGGC ATTCCGATCC GCATCGTGCG GTTCTTCACC GTCTACGGTC CGCGCGGGCG CCCGGATATG ACGCCGCACC TGTTTGTCGA TGCGATGGTT GCCGGGAAGG CGATCACCCT CTTCAACGGC GGCATCGGGG TCTATCGCGA TTGGACCTAC ATTGCCGACA TTGTGGCAGG GGTCATTGCA GCGCTCGATA TGGACGCTGC ATTCGAGATA TTCAATCTGG GGCATTCGAG TCCGGTGCAG TTGATCGATT TCGTGCGCAC CCTGGAAGAG GTCACCGGAT TGCGCGCCGG GATTGTTGCA CAACCACTGC CGGCGGCAGA TCCGCCGGTG ACGTTTGCAC GGATCGACAA AGCGACGCAG ATGCTCGGTT TTCAGCCACG CACGTCGCTT GAGGAAGGGC TGGCGCGGTT TTGGGAGTGG TACCGGGGTG AATATGGCGT ATGA
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Protein sequence | MRYLITGGAG FIGSHLSDAL LARGDQVVCI DNFNDYYDPA RKRRNIARAL TNPGYTLVEA DFRDADAMDR IFAHYRPQRV AHIGAMAGPR PSMQNPALYE DVNVRGTLIV LETAARYQVD GLVLASTSSV YGLSPTPWSE ESPTDRPLSF YAATKKAAEV LAYTAHRRHG IPIRIVRFFT VYGPRGRPDM TPHLFVDAMV AGKAITLFNG GIGVYRDWTY IADIVAGVIA ALDMDAAFEI FNLGHSSPVQ LIDFVRTLEE VTGLRAGIVA QPLPAADPPV TFARIDKATQ MLGFQPRTSL EEGLARFWEW YRGEYGV
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