Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3578 |
Symbol | |
ID | 5210556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4474200 |
End bp | 4475738 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597172 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_001277884 |
Protein GI | 148657679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCG TCGTTCACAA GGAGCCGACG GTGAACAAAT CAACAGAAGC GACGACAACT CCATCCGTCG CTCACCCTCC GCTCCCGATC CGTCGTCGCC GGATCGCGCC TTCAGGCGTG CTGATGGCAA TAGTCGATAC CTGCCTTATC TTGCTTGGGT TTGCTCTTGC GTACTGGATG CGCTATGTCA TCGACTGGCC CCCGCCATTC GACCAGCTGG TGCGCGAAGT TCAGGCGCAA AACTTTGTGC CGCTCAGCGC ATTCGCTCCC TTCGCCATCC TCCTGACCGC GTTGCTGATC GTTCAGTTCG CCATGCGGGG GCTGTACCGC ATGCCGCGTA CCGCCGGAGT GCTCGACCAT GCCAGCATCA TCGTCGGATC GACGACGACC GGCATTGCGA TTCTGATTGT AGTTGTCTTT CTCTATAAGC CATCGGAGTT CTACTCGCGC CTGATCTTTG CTTTTGCGCT GGTGTCGATC AGCACACTGC TGGTCGGCGG GCGCGCAGTG CTGATCGGTC TGCGCCGCTG GCGCTGGGTA CGCGGCATCG ACCGTGAACG GGTGCTGGTC GTCGGCAACA CCGGTCTGGG GCGTGAGGTG ATGGAAAGCC TGGTGGCGCA ACCCGATCTG GGGTATGCGC TCGTGGGCTT TCTCGATGAT CGTGAGACAC CGCTCAACCG TCGCACGGTT CACTTTCGGC GCCTTGGTCC GATCAGCGAT CTTGACGTAT GTCTGCGCGG TGGCGATATC GATCTGGTAA TCCTGGCGCT CCCGTTCTGG GAACATCATC GCCTGCCGGA ACTGGTCGAC ATATGTCGCT ATGCGGGCGT CGAGTTCCGG GTTGTGCCCG ATCTGTACCA GTTGAGTTTT GACCGGATCG ATATCGGCAA CCTGAGCGGC ATTCCGTTGA TCGGCTTGAA AGAAGTCTCG CTGCGTGGCT GGAACCTGGT CGTCAAACGG ACGATGGACC TGGCGCTGAC ATTGCTGGCG TTGCCCATCG TGTTCCCGCT GGGCGTGATG CTGGCGATCA TTGTGCGGCT CGACTCGCCA GGACCGGCGA TTTTCCGGCA GCGCCGGATC GGGCGTGATG GGCGCCCCTT CATCTGTTAC AAGTTCCGCA CGATGGTGGT CGATGCAGAG GAACGGAAGG CTGAACTGGC TGCCCTGAAC GAAGCCGATG GTCCGCTCTT CAAAATCCGC AACGACCCGC GGATGACCCG CGTCGGGCGG TTTTTGCGGC GTTATAGTCT GGACGAACTG CCGCAACTGT GGAACATCCT GCGCGGCGAT ATGAGTTGGG TTGGTCCACG TCCGGCAACT CCGGAGGAAG TTGCACAGTA CGAAGACTGG CACTATCGCC GCCTGACGGT TGTGCCTGGA TTGACCGGTC TGTCGCAGGT GTTGGGGCGC AGCGATATTT CATTCGACGA AACGGTGCGC CTCGATATTT TCTACACCGA AAACTGGACC CCCGGCATGG ATCTGCGTAT TCTGCTGCAA ACGATCCCCG TGGTTATCTC CGGGCGCGGG GCATATTGA
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Protein sequence | MNRVVHKEPT VNKSTEATTT PSVAHPPLPI RRRRIAPSGV LMAIVDTCLI LLGFALAYWM RYVIDWPPPF DQLVREVQAQ NFVPLSAFAP FAILLTALLI VQFAMRGLYR MPRTAGVLDH ASIIVGSTTT GIAILIVVVF LYKPSEFYSR LIFAFALVSI STLLVGGRAV LIGLRRWRWV RGIDRERVLV VGNTGLGREV MESLVAQPDL GYALVGFLDD RETPLNRRTV HFRRLGPISD LDVCLRGGDI DLVILALPFW EHHRLPELVD ICRYAGVEFR VVPDLYQLSF DRIDIGNLSG IPLIGLKEVS LRGWNLVVKR TMDLALTLLA LPIVFPLGVM LAIIVRLDSP GPAIFRQRRI GRDGRPFICY KFRTMVVDAE ERKAELAALN EADGPLFKIR NDPRMTRVGR FLRRYSLDEL PQLWNILRGD MSWVGPRPAT PEEVAQYEDW HYRRLTVVPG LTGLSQVLGR SDISFDETVR LDIFYTENWT PGMDLRILLQ TIPVVISGRG AY
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