Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3530 |
Symbol | |
ID | 5210507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4422775 |
End bp | 4423605 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597125 |
Product | hypothetical protein |
Protein accession | YP_001277838 |
Protein GI | 148657633 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCAT CGGGGATCAT TACATTAACA ACCGACTTCG GGCTGTCCGA TAGTTATGTC GGCATTATGA AGGGAGTTAT TCTGGGAATT GCGCGCAACG TAACGATTGT GGACATCACG CATCAGATCG CACCGCAGGA CATCCATCAG GCGGCGTATA TCGTTCAGAC GTTCGGGGCG TTTTTTCCGC CGGGAACGAT TCACGTGGTG GTGGTCGATC CGGGGGTGGG AAGCAAACGA CGACGCATCA TTCTCACGAC GCCGAATGCC GTGTACGTGG CGCCGGACAA CGGCGTCCTG ACGTATGTAT GGCGCGAAGC GATCTCGCAG TGGGGCACGG AGCACTGCGC CGTCTACGAT CTGACCGAGC CGCGCTACTG GTTGCCCTAC GTCAGCAGCA CCTTCCACGG GCGTGATGTC TTTGCACCGG TGGCGGCGCA TCTGGCGCTT GGGGTTCCGC CAGCACAGTT TGGTGAGCGG CGTGCGGAGA TTGTCGAAGC TGCACTCGAA CAACCGTCGC GCGGACGGCA TGGCGAGCTG GTGGGTCGCA TCATTCATAT CGACCATTTT GGCAACTGTA TTACCAACAT CACACTCAAG CATTTGCAGG AGGCGGGCAT TGGCGAGCGC ATGACCGCCC AGTTGATCGG GCAGCGCATC GAGGGGTTGT ACCGGACCTA CGCCGATGTC GCGATTGGCG CGCTGGTCGC ACTGATCGGC AGCAGCGATC ATCTGGAGAT CGCGGTGCGC AACGGCAGCG CGGCGCAAAC GCTGGGCGCC GGGATCGGCG ATATTGTGCG AGTGTTCCCC GCTTCGCATC AGGCAGCGTA G
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Protein sequence | MQPSGIITLT TDFGLSDSYV GIMKGVILGI ARNVTIVDIT HQIAPQDIHQ AAYIVQTFGA FFPPGTIHVV VVDPGVGSKR RRIILTTPNA VYVAPDNGVL TYVWREAISQ WGTEHCAVYD LTEPRYWLPY VSSTFHGRDV FAPVAAHLAL GVPPAQFGER RAEIVEAALE QPSRGRHGEL VGRIIHIDHF GNCITNITLK HLQEAGIGER MTAQLIGQRI EGLYRTYADV AIGALVALIG SSDHLEIAVR NGSAAQTLGA GIGDIVRVFP ASHQAA
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