| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3486 |
|---|
| Symbol | |
|---|
| ID | 5210463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4369803 |
|---|
| End bp | 4371218 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640597081 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001277794 |
|---|
| Protein GI | 148657589 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGC TGACCCTCAA ACTGACGCTG GCGTTTCTTC TGGTCGGACT GATCGGATCG
CTCATGGTGG CGCTGATCGT CGGGCTGCGC ACCCGCTCGG AGGTTGATCT CTTTCTCTCT
CTCCGTGATC GGACTATTCT TCTCAATGCG TTGCGCTCGT ACTATGAGAC GAACGGCGGC
TGGCAGGGGG TCGAGCAGGT GCTGGAACGG ACGGCGCCGC TCGATTTTTA CAGCCGGAAC
CTGGTGCTGG CAGACACTAA TGGCGTTGTG GTGTATGGAC GCAGACCGTA CCGACCCGGA
CGACAACTGG CGCCGGGGAT GATCGCGCGG GCTGAGACGC TGCGCTCGGA TGGCGAGGTC
ATCGGCTACT TCTTCTTCGT CGGTCGTCCC CCGCTCCCTC TGCTCAGTGA TCCACGCTGG
GCAGCCGAAG CAGCCCTGCT GCAACGTCTT GCCATGGCAA CTGTGCTGAG CGCAATCGCC
GCCACCATTG TCGCCCTGGT GGTCGGCATC GTGCTGGCGC GCACACTGAC CCGTCCCATC
CGCGAACTGA CGGCAGCGAC GCGCGCGATG GCACGCGGGC GTTTTGATCA GCGCGTGGTT
GTGCGTTCAC GCGACGAGAT CGGTGAACTG GCGCAGGCGT TCAATCAGAT GAGCGCTGAT
CTGAGCAGAG CGATCCAGGC GCGACGCCAG ATGACTGCCG ACCTTGCGCA CGATCTTCGC
ACACCGCTCA GCATTCTGCG CGGCTACACC GAAGGGTTGC AGGAAGGTCG CATCAGCGGC
TCACCGACCA TCTATCAGAT TATGCACGGG GAGGTTGAGC ACCTGCAACG CCTGATTGAC
GACCTGCGCC TGCTCTCGCT GGCAGATGCC GGCGCCCTGT CGCTGAACCG TCGTCCCGTC
GATCCGCGCG CCCTGCTCGA GCGCGCAGCC CTGGCGCATA TGGTGCAGGC AGAGCAGCAG
GGATTGACCA TCCGCGTCGA AGCCTCTGAA ACGCTACCAT CAGTTGCTGT CGATACCGAC
CGCATGGCGC AGGTGCTGAA CAATCTGGTG GCGAATGCGC TGCGCCATAC CGCACGCGGC
GAGATTGTGC TGACTGCGCG TGAAGAAGGC GCTCAGCGCG TTATCCTGGA AGTGCGCGAT
ACCGGCAGCG GTATTGCACC GGAGGATCTG CCGCGCATCT TTGATCGTTT CTACCGCGCC
GATCCGTCAC GCAGCCGCGA AGGAGGACAC CAGAGCGCCG GTTTGGGTCT GGCAATCGCA
AAGGCGATCA TCGAAGCGCA CAACGGCGCC ATCAGTGTGG CATCGCGTGT CGGCGAGGGT
ACAACCTTTA CGATCACGCT CCCCGTTGTT CGGGACCAGA AAAGCAGACC CGCACCCCAG
GAAACGTCGG TGACCGTGAG TACAGGGCAG AGGTAG
|
|---|
| Protein sequence | MRSLTLKLTL AFLLVGLIGS LMVALIVGLR TRSEVDLFLS LRDRTILLNA LRSYYETNGG
WQGVEQVLER TAPLDFYSRN LVLADTNGVV VYGRRPYRPG RQLAPGMIAR AETLRSDGEV
IGYFFFVGRP PLPLLSDPRW AAEAALLQRL AMATVLSAIA ATIVALVVGI VLARTLTRPI
RELTAATRAM ARGRFDQRVV VRSRDEIGEL AQAFNQMSAD LSRAIQARRQ MTADLAHDLR
TPLSILRGYT EGLQEGRISG SPTIYQIMHG EVEHLQRLID DLRLLSLADA GALSLNRRPV
DPRALLERAA LAHMVQAEQQ GLTIRVEASE TLPSVAVDTD RMAQVLNNLV ANALRHTARG
EIVLTAREEG AQRVILEVRD TGSGIAPEDL PRIFDRFYRA DPSRSREGGH QSAGLGLAIA
KAIIEAHNGA ISVASRVGEG TTFTITLPVV RDQKSRPAPQ ETSVTVSTGQ R
|
|---|
| |