Gene RoseRS_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3456 
Symbol 
ID5210433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4336845 
End bp4337486 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID640597051 
Productmetal dependent phophohydrolase 
Protein accessionYP_001277764 
Protein GI148657559 
COG category[R] General function prediction only 
COG ID[COG2316] Predicted hydrolase (HD superfamily) 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.986512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0301443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTACA CTGATCGCGC ATTAGCGATC CTGCACGAGT GGGTGCAGGG GGAACAACTG 
CGGAAGCACT GTTATGCCGT TGCTGCGTCG ATGCGTCACT TTGCGCATTT GAGCGGCGGT
GATCCCGATC TGTGGGGGGC GATCGGGCTG CTGCACGATA TGGATTTCGA GCGCTATCCG
CAGATGCCCC CGCCCGGTGA GCATACAACT GCCGCGTCTG AAGCCATCCT GTCCGGGCAG
GTCACCGAGC CGCCGTTGCA GATGCATCCG TTCGTCGGCG TCACGTATCT GCGTCTGCAG
GGCTGGTCGC CGGAGGTGTG TCGCGCTATT CTGTCGCACG CGAATTATAG CGGCGTTGGG
CGCGAAACGC TGCTGGAGAA GACGCTGGCA GCGGTTGATG AACTGTCGAG TTTTGTGGTT
GCGGTTGCGC TCGTCCGTCC AACGAAGAGC GTGTTTGAGG TCGATGTGAC GGCGGTGCGG
AAGAAGATGA AGGACAAAGC GTTCGCGCGC GCCGTGAGCC GTGATGAGAT TATTCACAAT
GCGGAAGCGC TTGGTATGCC GCTCGATGAG GTTATCGGGC ATGTTATCGA AGGACTGCGC
GCCGATGCAC AGCGGCTGGG CATTGCTGGC AGCAGCGCGT GA
 
Protein sequence
MTYTDRALAI LHEWVQGEQL RKHCYAVAAS MRHFAHLSGG DPDLWGAIGL LHDMDFERYP 
QMPPPGEHTT AASEAILSGQ VTEPPLQMHP FVGVTYLRLQ GWSPEVCRAI LSHANYSGVG
RETLLEKTLA AVDELSSFVV AVALVRPTKS VFEVDVTAVR KKMKDKAFAR AVSRDEIIHN
AEALGMPLDE VIGHVIEGLR ADAQRLGIAG SSA