Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3456 |
Symbol | |
ID | 5210433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4336845 |
End bp | 4337486 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597051 |
Product | metal dependent phophohydrolase |
Protein accession | YP_001277764 |
Protein GI | 148657559 |
COG category | [R] General function prediction only |
COG ID | [COG2316] Predicted hydrolase (HD superfamily) |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.986512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0301443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTACA CTGATCGCGC ATTAGCGATC CTGCACGAGT GGGTGCAGGG GGAACAACTG CGGAAGCACT GTTATGCCGT TGCTGCGTCG ATGCGTCACT TTGCGCATTT GAGCGGCGGT GATCCCGATC TGTGGGGGGC GATCGGGCTG CTGCACGATA TGGATTTCGA GCGCTATCCG CAGATGCCCC CGCCCGGTGA GCATACAACT GCCGCGTCTG AAGCCATCCT GTCCGGGCAG GTCACCGAGC CGCCGTTGCA GATGCATCCG TTCGTCGGCG TCACGTATCT GCGTCTGCAG GGCTGGTCGC CGGAGGTGTG TCGCGCTATT CTGTCGCACG CGAATTATAG CGGCGTTGGG CGCGAAACGC TGCTGGAGAA GACGCTGGCA GCGGTTGATG AACTGTCGAG TTTTGTGGTT GCGGTTGCGC TCGTCCGTCC AACGAAGAGC GTGTTTGAGG TCGATGTGAC GGCGGTGCGG AAGAAGATGA AGGACAAAGC GTTCGCGCGC GCCGTGAGCC GTGATGAGAT TATTCACAAT GCGGAAGCGC TTGGTATGCC GCTCGATGAG GTTATCGGGC ATGTTATCGA AGGACTGCGC GCCGATGCAC AGCGGCTGGG CATTGCTGGC AGCAGCGCGT GA
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Protein sequence | MTYTDRALAI LHEWVQGEQL RKHCYAVAAS MRHFAHLSGG DPDLWGAIGL LHDMDFERYP QMPPPGEHTT AASEAILSGQ VTEPPLQMHP FVGVTYLRLQ GWSPEVCRAI LSHANYSGVG RETLLEKTLA AVDELSSFVV AVALVRPTKS VFEVDVTAVR KKMKDKAFAR AVSRDEIIHN AEALGMPLDE VIGHVIEGLR ADAQRLGIAG SSA
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