Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3454 |
Symbol | |
ID | 5210431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4334243 |
End bp | 4335364 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597049 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001277762 |
Protein GI | 148657557 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0346302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGGAA TCATCATGAT CACTCCTGTC CACGTCGGCA TCATCGGCTG CGGGAATATC AGCGGCATCT ATCTGGAAAA CAGCAAAATC TTCGACGCGA TCGATGTTGT TGCGGTCGCG GATATCGATC CGGATCGGGC GCGGGATCGC GCGACACAGT ACGGAATCCC GAAAGCGTGC AGCGTTGAGG AATTGCTTGC CGATCCCGAC ATCGATCTGG TCGTGAACCT GACCACCCCC GACGCCCATG GACCGGTGGC GCTGGCAGTG CTGAACGCCG GCAAGCACGT CTACAACGAA AAACCGCTCG CCGTCACGCG CGACGAAGCC CGTGCGCTCC TCGATCTCGC CGCACAGAAA GGCTTGCGTG TCGGGTGCGC TCCTGATACG TTCCTTGGCG GTGGATTGCA GACCTGTCGT AAGTTGATCG ACGATGGCTG GATCGGGGAG CCGATCGGAG CAACCGCGTT CATGATGAGT CATGGTCCCG AAAGCTGGCA CCCAAACCCG ACCTTTTTCT ACCAGCCTGG CGGTGGTCCG ATGTTCGATA TGGGTCCCTA CTACCTCACC GCCCTGTGCG TGTTGCTTGG TCCGGTGCAG CGCGTGACCG GCTCGGCGCG CATTTCCTTC ACCGAACGAA CGATCACCAA TGAGTACAAC TATGGCGACA AGATTCAGGT CAACACACCC ACACACGTTG CCGGTACGCT CGATTTCGCC TCTGGTGCGA TCGCAACGAT CATCACCAGT TTCGATGTCT GGGCGTCGCA ATTGCCGCGC ATCGAGATCT ACGGCTCGCA CGGCACACTG AGCGTGCCGG ATCCGAACAC CTTCGACGGA CCGGTGTGGT TGCGTCGGGC AGGTGCACGT GAATGGTCAT CCATCCCGCT GTCGCACGGT TTTACTCGCA ACAGTCGCGG TATCGGTGTG GCTGATATGG CAACCGCGAT CCGGTTGGGG CGACCACACC GCGCCTCCGG CGAACTGGCG TACCACGTGC TCGACATTAT GCACGCCATT CACGATGCCT CGCGTGAAGG GCGTCATATC ACCCTGCGCA GCACGATGAC CCGTCCGGCG CCACTGCCGA CCGGTCTTGG TGAACGGAGC GTAGACCCAT AG
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Protein sequence | MRGIIMITPV HVGIIGCGNI SGIYLENSKI FDAIDVVAVA DIDPDRARDR ATQYGIPKAC SVEELLADPD IDLVVNLTTP DAHGPVALAV LNAGKHVYNE KPLAVTRDEA RALLDLAAQK GLRVGCAPDT FLGGGLQTCR KLIDDGWIGE PIGATAFMMS HGPESWHPNP TFFYQPGGGP MFDMGPYYLT ALCVLLGPVQ RVTGSARISF TERTITNEYN YGDKIQVNTP THVAGTLDFA SGAIATIITS FDVWASQLPR IEIYGSHGTL SVPDPNTFDG PVWLRRAGAR EWSSIPLSHG FTRNSRGIGV ADMATAIRLG RPHRASGELA YHVLDIMHAI HDASREGRHI TLRSTMTRPA PLPTGLGERS VDP
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