| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3449 |
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| Symbol | |
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| ID | 5210426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4328624 |
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| End bp | 4329697 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597044 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001277757 |
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| Protein GI | 148657552 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.395031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0386207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAC CTCTTGATCC CAACATTCCA CCCCCGCCTC AGACCGGTCG CACACTGACA
GAGCGCATTC GTGAAGAGCC GATTGGTCTG TGGGCGCAAC TGCTGACCGC GTTCCGCGAC
CTGAGCGGCA CATTCGATGC GTTCGCCAAT GACGCGAACC CGGAGGTGCG CGCTCTGGGG
CGCGCTGCGC GCTCGCGTCG CCCGCCGCAG GCGAATGATT ACTTTGCGAT CGGTGATCTG
TGTGCGCGCC TGGTTGTTCA GGGCAATACG CTCAGTCAGA CCTATGCCGC CAAAACGGTT
GCCGCCTATG CCCGCGCCGG CGAGCTGGCG AGTCGCGAAC GTTCCGTCGC TTATCGCGCT
ATCGTCTCAT TTGCCTTCTG GCTTGCCGAT GTTGCGCGCA TGCTGGGCAA CTACGAGTCG
CTCGAAACCG CCGTGTTGAT CTGCGAACAG GCGCGGCGCC TGATCGCTGA CGCCGGATGG
GTTGATGACG AGCGGCGGCT GCAGATGACC GAGGATCGTC TGCGCGATCA GGTGACGCAC
ATGCTCGAAG GCGGGCATGC TGCCGTGGAT AAGCGCGCAA GCGTTGAGCA GGAAAGCCGC
ATGCTCTGCG ATCAGGGGCA GATCCTGCTG CGTCAGGGGC GTCCCCAGGA GGCTCTGGAG
CGTTTCGAGG CGGCGATTGC CGCGTGGGAC GCCAACCAGA GCGCCTGGCT CTGGCGCGCC
ATGGCGCTGA CCGATCTCGG TCGTTTCGAT GAGGCGCTCG CCAGTTACGA CCGGGCGCTG
GCGCTCGAAC CGGAGAGCGC CGGTATGTGG AACAACAAGG GTTCGCTGCT GATGGAGTTG
GGGCGTCTGG AAGCAGCGCT CCAGTGTTTC GAGCGCGCCA TCGATCTGGC GGCGCCGGTT
TCGACGGTGA AAGCGGTCTA CTGGCTCAAC CGCGGCAAGG CGCTCTACAT GCTGGGGCGC
TACGCCGAAG CGCGCGATGC GCTGATGCAT TCACACGACC TCGATCCTTC CCCCGAAAGC
GCAGCCGGGA TCGCCGCCTG CCGTGAACGG CTCGAAGGTT CGTCTGAAGC ATAA
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| Protein sequence | MTAPLDPNIP PPPQTGRTLT ERIREEPIGL WAQLLTAFRD LSGTFDAFAN DANPEVRALG
RAARSRRPPQ ANDYFAIGDL CARLVVQGNT LSQTYAAKTV AAYARAGELA SRERSVAYRA
IVSFAFWLAD VARMLGNYES LETAVLICEQ ARRLIADAGW VDDERRLQMT EDRLRDQVTH
MLEGGHAAVD KRASVEQESR MLCDQGQILL RQGRPQEALE RFEAAIAAWD ANQSAWLWRA
MALTDLGRFD EALASYDRAL ALEPESAGMW NNKGSLLMEL GRLEAALQCF ERAIDLAAPV
STVKAVYWLN RGKALYMLGR YAEARDALMH SHDLDPSPES AAGIAACRER LEGSSEA
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