Gene RoseRS_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3444 
Symbol 
ID5210421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4322333 
End bp4322974 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID640597039 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001277752 
Protein GI148657547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0894416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG TCAAAATTTG CGGTGTGCGC ACACGCGACC ATGCACTGAC GGCAGTCGAT 
GCTGGCGCTG ATATGATCGG ACTGGTCTTC GCGCCGTCGC GTCGTCGGAT CAACCCTGAT
GACGCTGCCG TGATTGCAGC AGCGGTGCGC ACTGCCGCTG ATGATCGTCG CCGTCAGGTT
TCCCTGATCG GTGTGTTCGT CAACGACGAT GTGACGCGCA TTCGTAAGAT CGCAACGTTG
TGTGGTCTTG ATGGCATTCA ACTGAGCGGT GATGAGCCGG TTGCATACGC CGCAGATCTC
GCGCCATTTC TGGTTATTAA AGCAATTCGC TTCGACAACT CCGCGCACGA GCGCGACTGG
TTGAGTGAAG ACCAGGCGCA TGTGCGCTTG CTGGTCGATG CGCATGTGCC TGGCAGTTAC
GGCGGCGCTG GCGTGGTTGC CGATTGGGAT CGCGCCGCAG ACCTGGCGCG GCGGCGACCG
CTGTTACTGG CTGGTGGTCT GACGCCTGCG AATGTTGCCG AAGCTATCCG GTACGTTCGT
CCGTGGGGAG TCGATGTCAG CAGTGGTGTC GAGAGCAATG GCGTGAAAGA CCATCAGAAG
ATACGTGCAT TCGTCGCAGC CGCGCGCGCC GCTGCCCAAT AA
 
Protein sequence
MINVKICGVR TRDHALTAVD AGADMIGLVF APSRRRINPD DAAVIAAAVR TAADDRRRQV 
SLIGVFVNDD VTRIRKIATL CGLDGIQLSG DEPVAYAADL APFLVIKAIR FDNSAHERDW
LSEDQAHVRL LVDAHVPGSY GGAGVVADWD RAADLARRRP LLLAGGLTPA NVAEAIRYVR
PWGVDVSSGV ESNGVKDHQK IRAFVAAARA AAQ