| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3435 |
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| Symbol | |
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| ID | 5210412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4308537 |
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| End bp | 4309844 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597030 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001277743 |
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| Protein GI | 148657538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.127971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGCAC CAGGTATCCA TCGCTGGCGC GCGCTAGAAA CTGGCGCGCG TCGCTATCTC
CTGCACCTGG CGATCCTCAC GCTCAGCCTG TCGGTGGTGG TGCTGTACTA CAACCTGGCA
GTTGTGGCGC TGGGGTATTC GCGCGGTTTT CTTGGCATTT TGCAGACGGT GACGCAGGGT
GTGGCAGCGC TGTTGAGCCT GCCGCTCTGG TTAAGCGTGC AGCGCCTGGG GTTGCGCCGC
GCGCTTGCGG CATCGGTAGT GCTGTACGCT GTTGGGCTGC TGCTGTTCGC CGCGCTGCCG
CAGGCAGCGT CGCTGATCGT ATCTGCCGCA TTCATGGGAA TGGCTGCGGT GCTGGCGCAG
GTGACGGCAG CGCCCCTCAT GATGCGCCTC AGCAATGATG CAACCCGCGA TTATCTGTTC
AGCGCCAGCG CTGCGATCGC TATCGGCTTG AATGGCATTG GCAACCTCGG CGCCGGGTTC
CTTGCCGATG CAGTCGCGTA TCTGCTCAAT GTTCCGCCCG ACAGCGGCGT GACCTATCGC
GCGGTATTTG CCATTGCCGG GATCGGCGCA CTGGCATCGC TCCCGCCGTT GTTGCTGCTT
CGTGAACCAG AGCATCCATT GGCGTCACCG TCGTCGGAAA GCGTCGCCGC TCCGACGGAA
ACAGATGCGC ACTCCAGCAG CGCACCTCCC TGGCTGGCTC GTGCCCGACC ATGGTTCAGG
CGTCTACCCA CGCCGCTGCA GGCACTGATG CGCAAACCGG CGCTGGTGGT CAAACTTTTG
CTGCCGCCCT TCCTGATCTC ATGGGGGGCA GCGCTGCTCA TTCCCTATCT CAACCTCTAC
TTCCGCGAGC AGTTTGGTCT TGACAACCGC GCGCTCGGTG CGCTTTTCGC CGGGTTCGAT
GTGGCGACCG GACTGGCGGC ATTGACCGGT CCGGCACTGG CGGCGCGCCT GGGGAAGATC
CATACCGTGG TCGTGACCCG CGCTGTTGGG ATTCCGCTCC TGCTTCTGTT GGGCGCCGCC
TCCGACCTGT GGCTGGCAAT CATCGCCGCA CTGGCGCGCG TCGTTGCCTT CAATATGGCA
GCGCCGCTCT ACGATGCCTA TGCGATGGAA CAAACCGAAG AGCGCGCGCG ACCGTTCATG
ATTGGACTGC TGGGGGCGGC ATATAGCGCC GGGTTTCTCA TTGCACCCCT GATCAGCACG
TTCGTTCAGG AACGGTACGG TTTCAGACCG CTGTTCGTTG CGACAGCGGC GCTGTACGCA
CTTTCGGTTC TGGTGACGTG GCGATTCTTC GACCATCGTG TTTCTTGA
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| Protein sequence | MNAPGIHRWR ALETGARRYL LHLAILTLSL SVVVLYYNLA VVALGYSRGF LGILQTVTQG
VAALLSLPLW LSVQRLGLRR ALAASVVLYA VGLLLFAALP QAASLIVSAA FMGMAAVLAQ
VTAAPLMMRL SNDATRDYLF SASAAIAIGL NGIGNLGAGF LADAVAYLLN VPPDSGVTYR
AVFAIAGIGA LASLPPLLLL REPEHPLASP SSESVAAPTE TDAHSSSAPP WLARARPWFR
RLPTPLQALM RKPALVVKLL LPPFLISWGA ALLIPYLNLY FREQFGLDNR ALGALFAGFD
VATGLAALTG PALAARLGKI HTVVVTRAVG IPLLLLLGAA SDLWLAIIAA LARVVAFNMA
APLYDAYAME QTEERARPFM IGLLGAAYSA GFLIAPLIST FVQERYGFRP LFVATAALYA
LSVLVTWRFF DHRVS
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