Gene RoseRS_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3345 
Symbol 
ID5210322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4195161 
End bp4196114 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID640596943 
Productpeptide chain release factor 2 
Protein accessionYP_001277656 
Protein GI148657451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC TGACCCGCCT GAAGGAAGAA GTTGAGCGCA TCGAAGCGAT TGATCGTCAA 
TTGACGGCGC TTGCCGATCT GATCGAGCTC GCCGCAGCCG AAGACGACGA CTCGCTTCAG
GCGGACATCG CCGCCGAACT CAAGCGCACC GGCGAAGCCA TCGAAGCCCT TGAGATCGAG
GTGTTGCTCA ACGGTCCCTA CGACGACCGT GACGCATTCC TCTCGATCAA AGCCGGCACC
GGCGGAACCG ATGCGCAGGA TTGGGCGGAA ATGCTGCTGC GCATGTATAT GCGCTGGGGC
GAACGTCGCG GCTTTCAGGT GGCGCTGATC GATAAGAGCG AAGGGGAAGA AGCCGGGATC
AAGAGCGCCA CGATTGAACT GCGCGGTCCG TATGCCTACG GTAGCGCAAA AGCGGAAGCG
GGCGTCCATC GCCTGATCCG CCTGTCACCG TTCAATGCAG GTAATACACG CCAGACGTCG
TTCGCCATGG TCGAGGTGCT CCCCGAAGTG GACGATGCGC CGGAAGTCGT CATTCGACCG
GAAGATATCC GCATCGATGT GTTTCGCTCG TCCGGTCATG GCGGGCAGGG GGTCAACACA
ACCGACTCGG CGGTGCGCAT TACGTACAAG CCAGGAACGC CAGAGCAGAT TGTGGTGACC
TGTCAGAACG AACGCTCGCA GTTGCAGAAC CGTGAAACTG CCATGCGCGT CCTGCGCGGT
CGCCTGCTCG AACGCGAATT GCAGCGCAAA CGCGAAGAGC GCGCCCGTCT GCGCGGCGAG
TATCGCCAGG CGGACTTCGG CAACCAGATG CGCACCTATT ACCTTCACCC CTACACACTG
GTGAAGGATC ATCGCACCGA CCACGAGACC AGTGATGTGC ATGCGGTGCT CGATGGCGAT
ATCGACCCGT TCATCGAAGC GTATCTGCGC TGGAATGTCG GGCGTGACGC CTGA
 
Protein sequence
MQRLTRLKEE VERIEAIDRQ LTALADLIEL AAAEDDDSLQ ADIAAELKRT GEAIEALEIE 
VLLNGPYDDR DAFLSIKAGT GGTDAQDWAE MLLRMYMRWG ERRGFQVALI DKSEGEEAGI
KSATIELRGP YAYGSAKAEA GVHRLIRLSP FNAGNTRQTS FAMVEVLPEV DDAPEVVIRP
EDIRIDVFRS SGHGGQGVNT TDSAVRITYK PGTPEQIVVT CQNERSQLQN RETAMRVLRG
RLLERELQRK REERARLRGE YRQADFGNQM RTYYLHPYTL VKDHRTDHET SDVHAVLDGD
IDPFIEAYLR WNVGRDA