Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3334 |
Symbol | miaA |
ID | 5210311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4182655 |
End bp | 4183572 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596932 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001277645 |
Protein GI | 148657440 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.221167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCAC TCATCGCCAT CGTCGGTCCT ACTGCGGTTG GCAAAACGGC GCTCAGCATC CGCCTGGCGC AGCAGTTCAA CGGCGAGATT GTGTCGGTGG ACTCGCGCCA GGTGTATCGG GGGATGGACA TCGGCACCGC CAAGCCCACC CCCGCCGAGC GCGCCGCCGT GCCTCATCAT CTGATCGACA TCGTCGATCC GGATGAAGCA TTCTCGCTGG CGGTCTACCA GGACCTTGCC ACTGCCGCCA TCGCCGACAT CGCAGCGCGG GGACGGTTGC CATTCCTCGT CGGCGGAACC GGTCAGTACC TGGCAGCGGT TCTTCAGGGC TGGCAATTGC CGCGTGTGGC GCCCCGACCC GATATTCGCG CCGCGCTCGA GCGTCAGGCG GCAGAACTCG GCGCAGCAGC GTTGTACGCA CGTCTGGCGG AGATCGATCC GGCTGCCGCC GCCAGCATTC CTCCCAACAA CATTCGCCGC ATTATCCGCG CGCTCGAAGT ATACGAAGCC ACCGGTAAAC CAATTTCGGA GCAGCGTTCC GTTCAACCGC CGCCCTACCA CACCGTAACG ATCTGGCTCA CCCTGCCCAC GCCTGCCTTG TACGCCCGGA TCGACGCGCG CGTGGAGGCA ATGATCGCCG CCGGTTTGCT CGACGAGGTG CACCGACTGC TGGAACGTGG CTATCACTGG GACCTGCCCT CAATGTCGGG ACTGGGGTAC CGCGAATTTC GTCCATACTT CGAGGGGCGC ATCACACTCG ACGAAGCCAT TGCCCGCCTC AAGTACGACA CCCACGCTTT CGCCCGGCGT CAACCCGCCT GGTTCCGTCG ATTGCCCAAC GTGTTGACCC TCCCTGCCGA TGCTTCCGAT CTCCAGCAAC AGGCAGCCAC GATTGTCCGT CAATGGATCG ATGCTTAA
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Protein sequence | MIPLIAIVGP TAVGKTALSI RLAQQFNGEI VSVDSRQVYR GMDIGTAKPT PAERAAVPHH LIDIVDPDEA FSLAVYQDLA TAAIADIAAR GRLPFLVGGT GQYLAAVLQG WQLPRVAPRP DIRAALERQA AELGAAALYA RLAEIDPAAA ASIPPNNIRR IIRALEVYEA TGKPISEQRS VQPPPYHTVT IWLTLPTPAL YARIDARVEA MIAAGLLDEV HRLLERGYHW DLPSMSGLGY REFRPYFEGR ITLDEAIARL KYDTHAFARR QPAWFRRLPN VLTLPADASD LQQQAATIVR QWIDA
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