| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3333 |
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| Symbol | |
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| ID | 5210310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4180855 |
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| End bp | 4182075 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596931 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001277644 |
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| Protein GI | 148657439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.230737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCGT TTGCCGCCCG CGCGCGCGCG ACGATTGCGC GGATTTCGCC ACAGGTGTGG
CGCGTGCTGA CGCACAGTTT GCTCTTCGGG CTGGCTGGCA GTATTGCCGA TCTGCTCTTC
AACTTCTATC TGGTAAGCCT GGGGTATGGC GCCGACACCG CCGGATTGAT GGCGACCGTC
TATCGCGGCG CAGGGGCGCT GCTCGGTCTG CCGCTCGGCA TCCTGATCGA CCGGTTTGGT
GCACGAGCGT TGCTGGTGGT GGGCGCTATC GGTTTTGGTA TCGCGTATGC GCTGGTGTTG
ATGGTATCGC AACTCTGGGC GCTGATCCTG TTCGTCTTCC TGGCTGGTGC GGCAAATGTG
CTGACGCTCA CGGCGGTTGT GCCGCTGCTC ACCGGGATCA CCGACGAGGA GGAACGGGCT
GCGGTGTTTG GCATGAATGC GTCAGCCGGA CTGATCATTG GTCTGGTCGG GAGCGGTGTG
GGCGGGTTGC TTCCCGGAAC GGCAGCACTC TTCCTGGGAG TGGCGACGAA TGATACTGCC
GCCTACCGGA TGGCGCTGTC AATCGTGGTT GTGCTGGGTT GTCTCTCAGC GCTGCCGGTG
CTGATCGGAT TCCGCGCCAG GCAACCGGTG TTCTCACCGG CGCCTCTTGT GGCAGCACCC
CAACGACACA TGCCGCCAAT GCGCCTGGTG CGCTTTGCAC TTCCCTCGCT CCTGCTCGGC
ATCGGCGGTG GGTTGTTCCT GCCATTTCAG AACCTCTTCT TTCGCACTGT CTTCGGACTG
AACGACGCGG TCGTCGGTGT GATGCTGGCG ATGGGCGCGC TGGGTATGGG GCTTGGCGCG
CTGATGGGTG CGCCAGTAGC CGCCCGTCTG GGGTTGCGCC GGGCTGCCAG CTCCCTGCGC
TTCGGGGCGG TATTCGCCGT GACACTGATG TTCGCGCCAG TTTTGCCGGT GGTGGTTGTG
GGATACATGT TGCGCGGCGC TTTTGTTGCA GCCAGTTATC CGTTGAATGA TGCGCTGGTG
ATGCAGTTGA CCCCGTTACG ACAACGCGGG ATCGCAATCA GTCTCATGAG TGTCCTCTGG
TCGCTCGGCT GGTCGGCAGC GGCGTGGATC AGCGGACACA TTCAGGTGCA CTACGGCTTT
ACCCCGGTGC TCGCCGCATC GCTCGTGGCG TATGCGCTCT CAGCGTGGGC GATCTGGACG
TTGCGGGAGG AGGGGCGGTG A
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| Protein sequence | MFSFAARARA TIARISPQVW RVLTHSLLFG LAGSIADLLF NFYLVSLGYG ADTAGLMATV
YRGAGALLGL PLGILIDRFG ARALLVVGAI GFGIAYALVL MVSQLWALIL FVFLAGAANV
LTLTAVVPLL TGITDEEERA AVFGMNASAG LIIGLVGSGV GGLLPGTAAL FLGVATNDTA
AYRMALSIVV VLGCLSALPV LIGFRARQPV FSPAPLVAAP QRHMPPMRLV RFALPSLLLG
IGGGLFLPFQ NLFFRTVFGL NDAVVGVMLA MGALGMGLGA LMGAPVAARL GLRRAASSLR
FGAVFAVTLM FAPVLPVVVV GYMLRGAFVA ASYPLNDALV MQLTPLRQRG IAISLMSVLW
SLGWSAAAWI SGHIQVHYGF TPVLAASLVA YALSAWAIWT LREEGR
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