Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3281 |
Symbol | |
ID | 5210256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4132793 |
End bp | 4133458 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596877 |
Product | HAD family hydrolase |
Protein accession | YP_001277592 |
Protein GI | 148657387 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACTCA AAGCGTTGAT TTTCGACTTC GATGGACTGA TCCTTGATAC TGAAACGCCG GATTTCATCG TCCTGAGTGA ACAGTACCGC CGGTATGGCG CGGATCTTCG TCCTGAACGA TGGATGCACG GGCTTGGCAC AACCGATGGC TACGATCCCT ACGGCGAACT TGAGTCATTG ACGGGCGTCA TCCTTGATCG TGAAGCATTG CGACGCGAAC ATCGTGAACG TTATGTCGCA CTATGCGCAC AGCAACCGCT TCAACCTGGC GTGCGCGAGT TGATCGTCGC AGCCCGTAAA CGCGGTATCC GCCTGGCAGT CGCATCAAGC GCGTCGCGCG AGTGGGTCGA GGGATGGCTC GAACATCACC GAATACGAGA CAGTTTCCAT TGCGTGCGCA CCCGGAGCGA TGGGTTGCGG GTCAAACCCG CTCCTGATCT GTTCCTGAGC GCTGCCGCCT GCCTCGATGT GGCGCCAGAA TCCTGCGTCG TGCTGGAAGA CTCTCCGAAC GGCATGCGCG CTGCGGAAGC GGCAGGTATG CGCTGTATCG CAGTTCCGGT CGCGCTGCTC GACGCGCTGC CATTGCCGCC CCATACCCTG CGCCTGCGTT CACTGGCAGA CCTGCCGCCT GAACAATTGC TCGACCTGCT GGCGCGTGAG AACTGA
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Protein sequence | MTLKALIFDF DGLILDTETP DFIVLSEQYR RYGADLRPER WMHGLGTTDG YDPYGELESL TGVILDREAL RREHRERYVA LCAQQPLQPG VRELIVAARK RGIRLAVASS ASREWVEGWL EHHRIRDSFH CVRTRSDGLR VKPAPDLFLS AAACLDVAPE SCVVLEDSPN GMRAAEAAGM RCIAVPVALL DALPLPPHTL RLRSLADLPP EQLLDLLARE N
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