Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3280 |
Symbol | |
ID | 5210255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4131879 |
End bp | 4132796 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596876 |
Product | ribokinase |
Protein accession | YP_001277591 |
Protein GI | 148657386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTTG TTGTCTTCGG CAGCATCAAC ATGGATCTGG TGGTACGCAC ACCGCGCCTG CCGACGCCCG GTGAAACGCT GACCGGTCAT ACGTTCTTCA CCGCGCCTGG CGGCAAAGGC GCAAACCAGG CGGTCGCCTG CGCCCGGCTC GGCGTGCCAA CCCGCATGGT CGGTCGCGTC GGCGATGATC TGTTCGGCGA ACAATTGCGC GCCAGCCTTC GCTCCTTTGG GGTGCAGGAT GATGGCGTTC TGACAACGCC TGGTCCGTCA GGAGTGGCGC TGATCGCTGT CGATGACACA GCAGAGAACA CAATTGTGAT CGTTCCAGGC GCCAATGGCG CTGTCAGCAT CGCAGATATT CCACGGCTGG AACGGGCGCT TGATGGCGCC CGCGCGCTCC TGCTGCAACT CGAAGTGCCG ATTGAAACGG TCGTTGCGGC GGCACGCGCT GCGCACACGC GCGGAGTGAC GGTCATTCTC GATCCGGCGC CGGCATTGCC GCTGCCTGAC GAACTGTATG CGCTGGCGGA CATCATAACC CCCAATGAAC ACGAAGCGAC GACCCTCACC GGTATCGCCG TTCATGATGA CCAGGGAGCA ATCGCAGCAG CGCGCGCCTT GATCGCACGT GGCGCCCGCA GAGTGGCGCT CAAACTCGGC GCCTGCGGTG CGCTGACTGC CGATGCCGAA GGTGAGCAGT TCTGGTCTCC CTTCACCGTC ACACCGGTCG ATACGGTCGC TGCCGGTGAT GCATTCAACG GCGGGCTGGC GGTTGCCTTG AGCGAGGGGC GTTCCTTCGA TGAAGCCATA CGCTGGGGAC TGGCAGCAGG AGCGCTGTCG GTTACCAGAC ATGGCGCACA ACCATCGATG CCGGAACGGA ACGAAGTGCT GACCCTGCTT GCACAGGAGC ATCTGTGA
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Protein sequence | MAVVVFGSIN MDLVVRTPRL PTPGETLTGH TFFTAPGGKG ANQAVACARL GVPTRMVGRV GDDLFGEQLR ASLRSFGVQD DGVLTTPGPS GVALIAVDDT AENTIVIVPG ANGAVSIADI PRLERALDGA RALLLQLEVP IETVVAAARA AHTRGVTVIL DPAPALPLPD ELYALADIIT PNEHEATTLT GIAVHDDQGA IAAARALIAR GARRVALKLG ACGALTADAE GEQFWSPFTV TPVDTVAAGD AFNGGLAVAL SEGRSFDEAI RWGLAAGALS VTRHGAQPSM PERNEVLTLL AQEHL
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