Gene RoseRS_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3280 
Symbol 
ID5210255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4131879 
End bp4132796 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID640596876 
Productribokinase 
Protein accessionYP_001277591 
Protein GI148657386 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTG TTGTCTTCGG CAGCATCAAC ATGGATCTGG TGGTACGCAC ACCGCGCCTG 
CCGACGCCCG GTGAAACGCT GACCGGTCAT ACGTTCTTCA CCGCGCCTGG CGGCAAAGGC
GCAAACCAGG CGGTCGCCTG CGCCCGGCTC GGCGTGCCAA CCCGCATGGT CGGTCGCGTC
GGCGATGATC TGTTCGGCGA ACAATTGCGC GCCAGCCTTC GCTCCTTTGG GGTGCAGGAT
GATGGCGTTC TGACAACGCC TGGTCCGTCA GGAGTGGCGC TGATCGCTGT CGATGACACA
GCAGAGAACA CAATTGTGAT CGTTCCAGGC GCCAATGGCG CTGTCAGCAT CGCAGATATT
CCACGGCTGG AACGGGCGCT TGATGGCGCC CGCGCGCTCC TGCTGCAACT CGAAGTGCCG
ATTGAAACGG TCGTTGCGGC GGCACGCGCT GCGCACACGC GCGGAGTGAC GGTCATTCTC
GATCCGGCGC CGGCATTGCC GCTGCCTGAC GAACTGTATG CGCTGGCGGA CATCATAACC
CCCAATGAAC ACGAAGCGAC GACCCTCACC GGTATCGCCG TTCATGATGA CCAGGGAGCA
ATCGCAGCAG CGCGCGCCTT GATCGCACGT GGCGCCCGCA GAGTGGCGCT CAAACTCGGC
GCCTGCGGTG CGCTGACTGC CGATGCCGAA GGTGAGCAGT TCTGGTCTCC CTTCACCGTC
ACACCGGTCG ATACGGTCGC TGCCGGTGAT GCATTCAACG GCGGGCTGGC GGTTGCCTTG
AGCGAGGGGC GTTCCTTCGA TGAAGCCATA CGCTGGGGAC TGGCAGCAGG AGCGCTGTCG
GTTACCAGAC ATGGCGCACA ACCATCGATG CCGGAACGGA ACGAAGTGCT GACCCTGCTT
GCACAGGAGC ATCTGTGA
 
Protein sequence
MAVVVFGSIN MDLVVRTPRL PTPGETLTGH TFFTAPGGKG ANQAVACARL GVPTRMVGRV 
GDDLFGEQLR ASLRSFGVQD DGVLTTPGPS GVALIAVDDT AENTIVIVPG ANGAVSIADI
PRLERALDGA RALLLQLEVP IETVVAAARA AHTRGVTVIL DPAPALPLPD ELYALADIIT
PNEHEATTLT GIAVHDDQGA IAAARALIAR GARRVALKLG ACGALTADAE GEQFWSPFTV
TPVDTVAAGD AFNGGLAVAL SEGRSFDEAI RWGLAAGALS VTRHGAQPSM PERNEVLTLL
AQEHL