Gene RoseRS_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3271 
Symbol 
ID5210246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4122063 
End bp4123070 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID640596867 
ProductMerR family transcriptional regulator 
Protein accessionYP_001277582 
Protein GI148657377 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.107511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.193811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAGC AGGTCCATCA CCTGCTGACG CTGTCAGACG TGCCACGCTA CAATATCAAG 
GCAGTCGTTC AGCAGACCCA GGTCAATGTT TCGACACTAC GCGCATGGGA GCAACGCTAC
GGCGTTCCGC GCCCGACTCG CTCCGATCAC GGTCATCGGC TCTATTCGCA GCGCGATATC
GAGATCATTA AGTGGCTGAA GCAGTGTACC GAGGAGGGAC TGGCGATCAG TCAGGCGGTC
GCACTGTTGC GCGACATCAG CGACTCAGGT AATGCTACTC CTCGCGCGCC GCAATCGCAG
CCGCCTCCGC CAACACTGGC GGACGCCGGA TGGCCCGATC TGCGCACACA ATTGACCGAG
GCGCTCCTCA GCACGAACCT GCGCCAGGCG CATTTGCTTG TCAATACCGC CGTGGCCCTC
TTCCCTATCG AGACGCTGGT GCTCGATCTT TTTTATCCCA TGCTGGTCGA TATTGGCGAG
CGCTGGGCGC AGGGGGATGT GTGCGTGGCA GAGGAGCGGG TGGTGACCAA CTTCGTGCGC
CAGCGCCTGC TCGGGTTGTT GCAGATCCAC GCGCCGTTCG CCATCGGTCC GCGTCTGATC
GCCGGGTGCG CGCCTGAAGA ACAGCACGAG ATCGGGTTGA TTATGTTCTC GCTGCTGATG
GAACAACGCG GCTGGGAACT GATCTACCTG GGGCAAACCG TGTCGGCGGA AGGACTTGAT
GGCTTCCTGA TGCGCATGGC GCCGGCGCTT GTGTGTATGT CGGTGTCGAT GGCGGAGCAT
GTGCCCGGTC TGCTCGAAAT TGCCCGGATT GTCGAAGGTC GCCGTCGCCA TCGCCTGGTG
TTCGCCTATA GCGGTCAGGT GTTTGATCGC CATCCTGAGC TTCGCGGTCG CATTCCCGGT
ATCTTTCTCG GCAATGACCT GCGCGAAGCG GTTATCCGGG CGGATGATCT CGGTGAAGAG
ATCGATCCAG AACGCTGGAT GCGACAGTCG CACTTCTTTC GCCATTGA
 
Protein sequence
MLEQVHHLLT LSDVPRYNIK AVVQQTQVNV STLRAWEQRY GVPRPTRSDH GHRLYSQRDI 
EIIKWLKQCT EEGLAISQAV ALLRDISDSG NATPRAPQSQ PPPPTLADAG WPDLRTQLTE
ALLSTNLRQA HLLVNTAVAL FPIETLVLDL FYPMLVDIGE RWAQGDVCVA EERVVTNFVR
QRLLGLLQIH APFAIGPRLI AGCAPEEQHE IGLIMFSLLM EQRGWELIYL GQTVSAEGLD
GFLMRMAPAL VCMSVSMAEH VPGLLEIARI VEGRRRHRLV FAYSGQVFDR HPELRGRIPG
IFLGNDLREA VIRADDLGEE IDPERWMRQS HFFRH