| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3265 |
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| Symbol | |
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| ID | 5210240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4115657 |
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| End bp | 4116877 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596861 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001277576 |
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| Protein GI | 148657371 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0200135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAG TCCTCGTGGT AGGCGCGTCG GTTGGCGGCT CGACGGCTGC CGATACGCTG
GCGCGTGCAG GTGTGCCGGT TGTGATGCTT GAGCGTGATA CGTCGTATGT GAAGCCGTGC
GGCGGTGCGG TGCCGCCGGT GGCGTTCACC GAGTTTGACC TGCCGGAAAC GCTGATCTCG
CGCAAGGTGC ACCACGCCCT GGTGCATTCT CCGAGCGAAC GGGTCGTCGA AATCGAGGTT
GCCGGCGTCA ATCACAGCGA TCAGGATTAT ATCGCCATGT GCTGCCGCGA GGAGTTCGAC
CGCTACATCC GTCAGCGCGC CGTTCAGCGG GGTGCGATGT TGATCGAAGG TCAACTGGTC
GATCTGGCGT TCGATAAGGA GGGTGTGACT GCAACGTATC GCGAACGGTT CGGCGGCGCC
CGTCAACAGT TGCGCGTCAC GGCGGTGATC GGCGCGGATG GGGCGTATTC GACAACGGCG
AAACTGCTGG GTTTGCCCAA TCTGCCGCGC TGTATCGCCA TTCAGCAGCG CATTCGCCTT
CCGGCAGGCA AGATGGCGCG CTGGGAGGAT ACCGCCGATC TGTACCTGGG TCCTGAGGTC
AGCCCCGACC TGTATGCCTG GGCGTTTCCC AAGAGCGATC ATGTCGCCGT TGGCATCGGA
ACGGGACCTG CCCATAGCAA ACGCGCTCGT GAATTGCTTG CGAATTTGAA GCATCGTATC
CGCAGAGACC TGGAGGGCGG CGAGATCATT CTCGAAGAGG CGCATGCGCT GCCGATGGAA
CCGCGTGAAC ATATGGCGTT TGAGCGTGCA ATGCTCATCG GTGACGCGGC GGGTCTGGTG
GTGCACACCT CTGGCGAAGG TATCTACTGG GCGATGAAGA GCGGCAAAAT GGCGGCTGAA
ACGCTGATCG AGAGTCTGCC GGACGCATCG CTCACTGCGC TACGGCGCTA TGAGCGTCGC
TGGTGGAAGA CCTATGGCAC GATGTATCGT TTCCTGGTCT TCTTGCAGAA GTGGGGGTAC
GGCAGCGCGC GGCAGATGGA AGTGTTCACC GACATGTGCC GCAATCTGGA TGTGCAACGA
CTGACATTCG AGTCGTATAT GCACAAGACG ATGGCGCCGG TGCCGTGGCT GGCGCAGTTG
CGGATGACGG CGGATATTAT CGCTGCCCAG GTGCGTCACT ATCTGCCGCG CCGTCGAACC
GATCAACCGG CTGTCGCCTG A
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| Protein sequence | MDPVLVVGAS VGGSTAADTL ARAGVPVVML ERDTSYVKPC GGAVPPVAFT EFDLPETLIS
RKVHHALVHS PSERVVEIEV AGVNHSDQDY IAMCCREEFD RYIRQRAVQR GAMLIEGQLV
DLAFDKEGVT ATYRERFGGA RQQLRVTAVI GADGAYSTTA KLLGLPNLPR CIAIQQRIRL
PAGKMARWED TADLYLGPEV SPDLYAWAFP KSDHVAVGIG TGPAHSKRAR ELLANLKHRI
RRDLEGGEII LEEAHALPME PREHMAFERA MLIGDAAGLV VHTSGEGIYW AMKSGKMAAE
TLIESLPDAS LTALRRYERR WWKTYGTMYR FLVFLQKWGY GSARQMEVFT DMCRNLDVQR
LTFESYMHKT MAPVPWLAQL RMTADIIAAQ VRHYLPRRRT DQPAVA
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