Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3250 |
Symbol | |
ID | 5210225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4095511 |
End bp | 4096383 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596846 |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | YP_001277561 |
Protein GI | 148657356 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0118943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000183638 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAGCATTC TGGTCGATAA AAACACCCGT TTGCTCGTGC AGGGGATCAC CGGGCGCGAG GGTGAGTTCC ATACGCGCCA GATGATTGCT TATGGCACGA ACGTGGTTGC AGGTGTCACG CCGGGTCGCG GTGGGCAGAC CGCGATCGAC GGCAGGGTGC CGGTGTTCAA CACGGTGGCG GAAGCCGTCA AACAAACCGG TGCGAATGTT TCGGTCATTT ACGTCCCGGC AGCCTTTGCG CCGGATGCGA TGCGTGAGGC GGCGGCGGCT GGCATCCCGT TGATCGTCTG CATTACCGAA GGCATTCCGG CGAACGACAT GGTGGCGACC TACGCCTTCA TTCGTGAACA TGGCGCGCGC CTGATCGGAC CGAACTGCCC CGGGTTGCTG ACCCCTGGTC AGGCGAAGGT GGGGATCATT CCGGGCAACA TCGCCACTCC CGGTCCGGTC GGGGTGGTGT CGAAGAGCGG CACACTCACC TACGAGGCGG TCGATGCGTT GACGCGGATC GGTCTGGGGC AGACGACGAT TGTCGGGATC GGCGGCGACC CGATCATCGG CACCTCCTTT GTCGATGTGC TGGAGATGTT CCAGGCTGAT CCTGAGACGG CTGCAATTGT GCTGATCGGC GAAATCGGCG GGGCGGCGGA GATCGATGCC GCGAAGTATA TCGCGGCGCA CGTCACGAAG CCGGTCGTCA GTTTCATCGC CGGGCAAACG GCGCCGCCGG GCAAACGGAT GGGGCACGCA GGCGCGATCA TTACCGGCGG CGAAGGCACC GCCCAGGAGA AGATCGCAGC GCTCGAAGCA GTGGGTGTGC GCGTGGCGCG CCTGCCGACC GATATTGCTC AACTGGTCCG AGAGGTCCTG TAA
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Protein sequence | MSILVDKNTR LLVQGITGRE GEFHTRQMIA YGTNVVAGVT PGRGGQTAID GRVPVFNTVA EAVKQTGANV SVIYVPAAFA PDAMREAAAA GIPLIVCITE GIPANDMVAT YAFIREHGAR LIGPNCPGLL TPGQAKVGII PGNIATPGPV GVVSKSGTLT YEAVDALTRI GLGQTTIVGI GGDPIIGTSF VDVLEMFQAD PETAAIVLIG EIGGAAEIDA AKYIAAHVTK PVVSFIAGQT APPGKRMGHA GAIITGGEGT AQEKIAALEA VGVRVARLPT DIAQLVREVL
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