| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3245 |
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| Symbol | |
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| ID | 5210220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4086588 |
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| End bp | 4090907 |
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| Gene Length | 4320 bp |
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| Protein Length | 1439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596841 |
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| Product | hypothetical protein |
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| Protein accession | YP_001277556 |
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| Protein GI | 148657351 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0883783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGTT TCTCTTCCGC CCTCACGCTG CTCACGCTTG TGATCATCGT CGGAGCGCTG
TTGCCTGTCG GTCCTGCCGC GTCAACGCCG GTCGCGCTGG CATCAGGGGT GTTTGTGGTG
ACGACGGCGG AGGATGCAGA CGGCTCGACA TGTCCGGTTT CAACAAGCGG CGACCCTGCC
AATCCCTCTC CCACCTGTTC GTTGCGTCAG GCGATCAATG CGGCGAATGC CGCTGGCGGG
GGTGTCATCA AGTTCAACAT TCCGCCGCAG GTTCCTGCTT TTGAAACGAA CGGTCTGTAC
CGTGCGATCC GTATTCGGAT TAGAAACGAT AATGAGCCGC TGCCAGCGCT TGCAGGAAAT
ATCACCATTG ACGGAAAATC CCAGGAGATC AACTGGCCCG CCCAGGCAAA TCTGATCGGT
CCTGAAATCA TTATCGATGG ATCAGAACTG ATCAATCGCA GCGGCATCCG GTTGACCGGC
AACAACAATG TCGTGCGCGA AATTGCGGTT GTGAACTTCA AGTCCAGCAG TTCGACACCG
AGTTTCGGTC AGGGGGTTGG TATCGATGTG GTCAGCGGCA GCAATCATCG TATCGAAGGC
AACTATGTCG GCATCGATCC GGTATCGCCG ACGCTGACCC TGAGCGGCAA CGGCTTTGCT
GGCATCTGGG TCGAGCAGAG TGCGACCGAT ACGGTGATCG GCGGGTTGCG CACCGATCTT
TCCAAAGCGA ACTTCATCAG CGGCAACGAT CTGGACGGGA TCGTGGTGCA GGGTGCGCGC
ACGAAGATCC AGGGCAACTT TATCGGGGTC GGGCGCCTGC TCAGCGCCGA AACGTTTGCA
TTGCGCAATC TCGGCGCCGG TATTATTGTT CGCTACGCGG ATGGCACGGT GATCGGTGCA
ACCCCCGATC AACCGGATCC GGCGTATGGC AATGTGATCG CCGGGAACAA CAATTTCGGG
ATTGTGATTA ACGGCGGCAC AAATACTCAG ATTGCCGGGA ATTATATCGG TCTTGGGTCG
AATGCTGCGT CTCAGTTGAT CGTCAGCATT CCGAATGCCG CTGGCGGCAT TGAGGTGCAT
TCTGAAGAAT TTCCTGCCAC GAACACACAG ATCGGTCTCC CATCACCCGA TTTGAGCACT
AACAGGTTAC GCAACTTCAT TGCCGGCAAC ACCGGTCCGG GCATTGTCTT GCGTGGCCAT
AGGACGACCA ATACCACAAT TGTTAACAAC TATATCGGCT TGAACGACCT GGGAAATCCG
GTCAGCGCGC CGAACAATAC CGGCGGCGGT GTGGTGATCG AGCGTGGCGC GCGAAATGTG
ACGGTCGGTG GAACAACGCT CAATGAGCGC AATGTGATCT CCGGGAATAC CGGCGACGGC
ATTATTATTC GCGGTCTCAA TCCACTGCGG ACCACCTCCA ACAACACCAT CATCGGCAAC
TATATCGGCA CCCGCGTTAT CGGTTCGCTC ATTCTGCCCG GTTACGGCAA CCGCTCCGGC
ATCGTGATCG GCGATCATGT GTCCGATACG GTAATCGGGA CGCCGGAGGC GCCGAATCGG
ATCGCGTTCA ACTTCAACTA TGGCGTGGCG ATTACCGGCA CCAATGTGCT GACGACGACG
CTGAGCGATA ACCCGATCAT CTCCAACGGC TACGATGGCG TCTATGCCGC GTCCGCTGTC
AACCTGCGCG TCACTGGCGT CAATACAGCG ACGCTGATCG CCAATAACGG CTGGAATGGC
GTGCGGATTG ATACCGGTGA ACTGGTCGCG CTGGAGAATG TGGTCGTGAG CAACAACGGC
GACGATGGGG TGCGCCTGAC GAATGTCGCG GACGTGACGC TCCGTTCGGT GACCGCGCAG
TTGAACGATG ATGGTCTCAA TGTTGCAGGT GCGCTGTCGG TGCTGGTCGA AAACAGTCAG
TTCAACGCCA ACCGCGAAAA TGGCATCCGC TACGCGGGCG GCATCACCAC AACGCTGACC
AATCTGACGG TGCAGCAGAA TGGACAGAAT GGTCTGTGGT TCACCGGCGT TCTGACGAAT
ACGCAGATTG TGGCGACACA GGCGATCAGC AATACGCTCA ACGGGTTCCT GATCAATGGC
ACAACCGACG TCATGACCAT TTCGGGCAAT GAGATCGTCG GCAACGGCGC GTCCGGCATG
GCGCTGACCC TGACGCCGGG AATGGCGCCG GTGCGCGATG TGATCGTGTC CGGCAATACC
CTCGACCGCA ACGCCTTCAG TTCGCCAGCC TTCGGCGTTC AGATTAGCGG CGGTACAGAG
GTGGTGACCG TCACCGGCAA TATTGTCGAT GGAACGCGCA ATGGCGGCGG GTTCCTGCTC
CCCGGTGCGA ATCGTATGAC GATCAGCGGC AATCTGGTGC GCTACAACAA CGGTCCCGGA
TTCCAGGTGT CCGGTGGCAG CGATAGCGTG ATCATCGAAG GGAATGAAGT CATCTCGAAC
ACCCTCGGCA TCGAGGTGCG CGATGCGGCG ACCATCGATG TGGTCGTTCG CGGCAACAGC
ATCTACCAGA GCGGCGCAAC CGGTTGGGGC GGCTTCGGTT CCGGCGTCGG GGTTGCCGTC
AACAACGCGC AGCGCACACG GGTCGAGGGG AACTCGATCA CTGCAAATCT CGGCGCAGGG
GTGCATGTGC AGGGTGCGGC GACGCAAACG CGGGTGCTGG GGAATTTCAT CGTCAACAAC
GCACTTGGCG TGCTGGTCGG CGCGCCGGTT GGCGGTCCGT TTACGCCGCC CTATCCGCAG
CAGACGCAAA TCCTGAATAA CAGCATCAGC GGCAACGGCA TCCCGCCCGA CGGTCCGTTC
CCGGTAGACG AAACGCTGCT CGGACGCGGG ATCGTGCTCA ATCCCGAAAC CCCCACCGGC
GGCGTCGCCG GTAATCCGAA CAACGACATC GATCCGCCGC TCCAGTCGTC GTTGCGGATG
AACGCAGCCG GTGTGCTGAC AGGGCAGGTG GATACCACGG GCGCTCCCGG CGGGTGCCCG
TCGATCGGCG GTGTGCGCTG TCTGATTCAG ATATTCCGCC CTGACCAGAC GATGCTCGAT
GGGCAGGGTC AGGAGTTTGC CGGCGAAACG GTGGTTGATG CCACCGGCGC GTTCACCGTC
ACGGTCGGCA GCATCCCGCG TCAACTGACG CTCACGGCGA CCGACCCGGT CAGCAACACG
TCGCGCTTCG CCATCTTTGA GCCGCGCCCG TCGTTGAGCA TCAGTGCGCC CCAGGCGATA
ACGGCGGATC CGGGGCAGGT GATCACCTAC ACCCACACGG TAGTGAATGA TGGCAATATC
GAACTGAGTG ATGTGCGCAT CGCCGTCACG ACCTCGCGCG GCTGGGAAGG GTTGTCGCCG
CCGATTGCCA TCCAACCGCC TGGATCATTC TCGCTGGCGC CGGGCGCGTC GCGCGCGATC
ACCGTTTCGG TGCGTGTGCC GACCGGCGGC GGTCCGCAGG CGGCGCCGGG CGTCGATCTG
ATGACGGTGC GCGTGGATGG GACAACGGTC AGCGGCGACA ATACCTACAC GGCGACTGCG
TCGCTGGTGA ATACAACTAC TGTCAATGCC CGCATCTACC TTGAGTTGAC GCCGGCGCTC
GTCGAAGGGC GTGGCAATCC GGGCGTGGCG GTTCCGTATG TGTTCCAGGT GCGCAACACC
GGCAATATCT CAGCCACAAC CAGCATCACT GCGACCTTCG ATGACCTGGT CTTTAGCGTC
AACTGGCAGC GGTCGCTTTC GACGACGAGC CTGACGATCC CGCCGGGCGA GACGCGCTCG
TTCCAGTTGA CGGTTACCGT GCCGCCGGAA AGCGCCAATC CGGTTTCGGG AACCTATGCC
GATGTGACGG TGGCGATCAC GCCGACGCTG CCGATCGACC CATCGCAGGC CAGAACGGCG
AAAGCACGGA CGATCGTCGG TCAGGTGTCG CGCGCGCAGA TAACCCCGGC AAGCGATGAG
AAAGAAGGCA AGCCAGGCGA AACGGTGGTG TTCCTCCACG AGATTACGAA CCTTGGCAAC
GGCGCCGACA CCTTCCAGAT CAACGGCACG CCTGCACTGG GCAGCGTGGT GCGCTTCACG
TCACTGACAA GCGGGGTGAC GATCAACAGC GAGGGGCGCT TCACACTGGC TCAGGGCGCA
ACCGCAATCA TCCGGGTCGA GGTGACGGTC AATCCGCAAC TTGCCAACGG CAATGTCGAG
AATGTCTTCA TCGACCTGCG CGACCTGAAC GGCAATGTGA TCGGCGGGGC GTTTGCGCAG
GATCGGGTGC GGGTGGTGAG CAGCATCCGC AGGGTCTATT TGCCGCTCGT CATTCGGTAG
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| Protein sequence | MSRFSSALTL LTLVIIVGAL LPVGPAASTP VALASGVFVV TTAEDADGST CPVSTSGDPA
NPSPTCSLRQ AINAANAAGG GVIKFNIPPQ VPAFETNGLY RAIRIRIRND NEPLPALAGN
ITIDGKSQEI NWPAQANLIG PEIIIDGSEL INRSGIRLTG NNNVVREIAV VNFKSSSSTP
SFGQGVGIDV VSGSNHRIEG NYVGIDPVSP TLTLSGNGFA GIWVEQSATD TVIGGLRTDL
SKANFISGND LDGIVVQGAR TKIQGNFIGV GRLLSAETFA LRNLGAGIIV RYADGTVIGA
TPDQPDPAYG NVIAGNNNFG IVINGGTNTQ IAGNYIGLGS NAASQLIVSI PNAAGGIEVH
SEEFPATNTQ IGLPSPDLST NRLRNFIAGN TGPGIVLRGH RTTNTTIVNN YIGLNDLGNP
VSAPNNTGGG VVIERGARNV TVGGTTLNER NVISGNTGDG IIIRGLNPLR TTSNNTIIGN
YIGTRVIGSL ILPGYGNRSG IVIGDHVSDT VIGTPEAPNR IAFNFNYGVA ITGTNVLTTT
LSDNPIISNG YDGVYAASAV NLRVTGVNTA TLIANNGWNG VRIDTGELVA LENVVVSNNG
DDGVRLTNVA DVTLRSVTAQ LNDDGLNVAG ALSVLVENSQ FNANRENGIR YAGGITTTLT
NLTVQQNGQN GLWFTGVLTN TQIVATQAIS NTLNGFLING TTDVMTISGN EIVGNGASGM
ALTLTPGMAP VRDVIVSGNT LDRNAFSSPA FGVQISGGTE VVTVTGNIVD GTRNGGGFLL
PGANRMTISG NLVRYNNGPG FQVSGGSDSV IIEGNEVISN TLGIEVRDAA TIDVVVRGNS
IYQSGATGWG GFGSGVGVAV NNAQRTRVEG NSITANLGAG VHVQGAATQT RVLGNFIVNN
ALGVLVGAPV GGPFTPPYPQ QTQILNNSIS GNGIPPDGPF PVDETLLGRG IVLNPETPTG
GVAGNPNNDI DPPLQSSLRM NAAGVLTGQV DTTGAPGGCP SIGGVRCLIQ IFRPDQTMLD
GQGQEFAGET VVDATGAFTV TVGSIPRQLT LTATDPVSNT SRFAIFEPRP SLSISAPQAI
TADPGQVITY THTVVNDGNI ELSDVRIAVT TSRGWEGLSP PIAIQPPGSF SLAPGASRAI
TVSVRVPTGG GPQAAPGVDL MTVRVDGTTV SGDNTYTATA SLVNTTTVNA RIYLELTPAL
VEGRGNPGVA VPYVFQVRNT GNISATTSIT ATFDDLVFSV NWQRSLSTTS LTIPPGETRS
FQLTVTVPPE SANPVSGTYA DVTVAITPTL PIDPSQARTA KARTIVGQVS RAQITPASDE
KEGKPGETVV FLHEITNLGN GADTFQINGT PALGSVVRFT SLTSGVTINS EGRFTLAQGA
TAIIRVEVTV NPQLANGNVE NVFIDLRDLN GNVIGGAFAQ DRVRVVSSIR RVYLPLVIR
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