| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3244 |
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| Symbol | |
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| ID | 5210219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4081097 |
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| End bp | 4086586 |
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| Gene Length | 5490 bp |
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| Protein Length | 1829 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596840 |
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| Product | parallel beta-helix repeat-containing protein |
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| Protein accession | YP_001277555 |
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| Protein GI | 148657350 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1470] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.443436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.888185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTGCC CATTGGCGCG TGCATATCGT CTTCTCTCCG TTCTTGCGCT GCTGGCGTTC
TTTGTGGTCA CACCGGCGCC GCCGGTTCTG GCTGCGACGT TCACTGTCAA CAGCACCGGC
GATGACCCCG ATGCCAGTCC CGGTAACGGC GTCTGTCAGA CCGCTGGCGG TCAGTGTACG
CTGCGCGCGG CGATCCAGGA GGTCAATGCG CTGACGCCTG GACCGCATAC GATTGCATTC
AACATCCCAA CCGCGTCGTC CGGCTACAAT TCATCCGGCT ACTGGGTTAT TCGACTGGCG
AGCGCGCTTC CTGCGATCAC CGTCGGGAAC GTCACCATCG ACGGCAGGAC GCAACCGGTT
GGCAATGCGA GTTGGGCGCA CCCGCGTGTT GTGCTGGACG GATCGTTGAT CACCGGCGGC
GCGAATGGTC TGACGATCAT CTCATCGGGA AACACCATCC GTCGCCTGAC GATCCAGAAC
TTTGTGGCCA ATCCGTTCGA TTTTAGCGAC ACAACCGGCA GTGGTATTTT TATCCGCGAC
TCGACGAATA ATCGTGTTCA CGGGTGCTAC CTGGGCACGA CGCCGGACGG CACTTCGGCG
GCGAGAAATC ATCTCGCTGG CGTGCAGATA CGCAACGCGG GCAACAATAT TATCGGCAAC
CCAACGGCGG GAGCGGGTCC CGACATCGAT ACGGCGGGCG ATAATGCATT CGGCAACCTG
ATTGCCGGCA ATGGTCGAGG AACGTCTGGT ACGTCTGCGA ACGTGTATCT GACTGCCTCT
ACTTACGATA ACGGACGCGG CAATGTCATC CGTGGCAACC TGATCGGCAC GAACCTGGCA
GGCACTGCGA AGATTGCTGG CGATACGGGC AATCAGCGGT ATGGCGTGCT GCTCTACCAG
TACCTGGATG ATACGATCAT CGATGCGAAC GTTATTTCAG GGCATGATGC GACGTCCGGT
TCCTACGGCA TCTACATGTA CGGTCTTAGT GTCGATGGTA CGGATAGCCC GCTCGATACG
GTCATCACTG GCAACGTCAT CGGCACGACG AAAGGGGGAA TCTCAACCAC CCGCGTGCCC
AACAGGGTCG GCATCTACAT TGCAGGTGCG CACAATACCC GGATCGGCGG GGTAACGCTG
GCGGAGCGAA ACATTATCTC CGGCAATGGA ACGACACCGC CAGGAGGTCA TGGTATTCAC
CTCCGCGGTC GCTCGGTGTT GAATACAACC ATTCAGGGCA ACCATATTGG TCTGAACGCG
AATGGTGCAT CGTTTGGGCG CAGCGGAACC GACTCGCTGG GCAATCTGGG GCACGGCATA
TTCGTCGAAA ACAATGCGCG CCAGACAACC ATTCGCAACA ATGTGATCGC AAATAACTGG
GGGAATGGCA TTCTTCTGGC AAGCGATGGG GCAGTGGTTG TCGGGAATCG GATTGGGATC
AACACTGCCA CGCCGCCGAT TTCCGACGAT GCTTTCGCCA ACGGGCAGGC GAGTATCTGG
ATCAGCCGTG GAACGACATC AAGCACATCG CCGGGCAATC GGATCGGCGG CACGAACCCC
GGCGATGCCA ATATCATCGC GTATGGTCTG GGATCGACGC CGGTCGCGGT GCAGATCCGC
TCCGATGGAA CACCGAACAC CTCGAATAAT GAGGTGATCG GCAACTTTAT CGGCGTGGCT
GCGACCGGTC AATCGTTGCG CGCCAGTCCG TCACCGAGTT CAATCGGGGT CTACATCATT
GGCAACAGTT CTTCGCTGCG GGCGGATAAC AACCGGATCA TCGGCAATAC CATCGGCGGG
TTGGGAACAG GAATCCAGAT CGAGTCAACG TTTACAACAG GCAACGAGAT CAGCGCCAAC
ACCATCGGTC TTGCCAGCGC GGGCAACCAG CGTGGCGTCT GGCTATTCCA GACGAGCGGC
AATACCATTG GCGGGGCTGG CGGCGTGGGG GTGAACAATA CGCGCAATGT GCTGTCGTAC
AATACCCTGC ACGGCATCCT GGTCGGCGTG AATGCGAACG GCAACACGCT GTTGCGCAAC
CTGGCGCACA ACAATGGCGG CACATCGGGT GGTCACGGTG TGTTCGTCGA CTCAACCGTC
AGTCAGGTGC GCATTTCCGG TACAGAAACG CGCGACAACA GCGGCAAGGG GATCAACCGC
GCGGGCAGTC CGCCGCAGCC GCCGACGATC AGCGGCATTA CCGGCGGCAG TCCTCCCACC
CTTCAGGTGC AGGTTCCATC TGGCGCGAAC TGTGGCGCCA GCGGGTGTCG CATTGAAGTG
TTTACCAGCC CTACCCGCGA TGATGCTGAG GGTCCGCGCT ACCTGGCGTT CCTCGATGGC
GCCTCCGCTG GTGCGACGGT CAATGTGCCG GTGCCAGACT GCGACCGCTT CTTCTCGGCG
ACGGTCACCG ATCAGGGCGG GAATACCTCT GAATTCAACC TCACCATGTT CGAAGCGCCG
TTCAGTTGCC AGACCGACTT CACGCTGGCG CAGACGGGGC GCAGTCCGCC GGGAACCGGT
CCGGTCAATC CGGGCACGAA TGTTATCTAC ACCTACACGG TGACGAATAC CGGCGCGTCG
CCGATCACGG TCAACATCTC GCGCAACGAC ACGACCGGCT GGGCATCGAC GCCGACGCCC
TCGACGCTCA ATCTGAACGC CGGGGCGTCG GAAACGTTCA CCATTTCCTT TGCGGTTCCC
GCCAATGCGC TGGCGGGGAA CTACACCTTC AGCGTGACGG CGCAGGTCGG CGCAACACAG
CGCACCGTCA ATACGACCAC GTCCGTCGCG CAGGTGTACG GCGTGGCGAT TGCGCCAACC
AGTCAAACTG CCACGTTCGC GCGACCGCAG GTGATCACGT TTACGCATAT GATCACCAAT
ACCGGCAACG GCATGGACAC GATAACCGTC ACAGCCAGTG TTTCGCCGAA CGATGGCGCG
ACCGTGAGCG TGGTTGGCGG CAACTGCGTG AACCTGGCGG CGTTTTCGTC ATGCACGCGA
CAGATTCAGT TGAACATTCC CGTCGGTCCC GGTTCGTCGC TCTACACGGT GACGGTGACG
GCGCGATCAA GCGGCAATCC TGATGTTCAG GCGACGGCGA CCGATACCGC TTCGGCGGGC
GCTGCGCCGC AGATCACGCC CGCTTCTCAA CTGAGGGAGG CGCTGCCCGG CGAAACCGTG
ACATTTACGC ATACGGTGAC AAACATCGGT CAGAGCGCCG GAACCTTTAC GCCATCGCTT
ACTCTGTCGC AGGGCAGCCC CTGGAGCGGC GCGTTGACCG ATCCGGCGCC GTTCAACCTG
AATGCAGGCG AGTCGCGGGT GGTAACCATG ACGGTGACCG TGCCGAATGC GCCGATTCCG
GATGCTGGCA CGCTGGTGAC GGCGACGTTG ACGGTGCTGG CAAGCGGCGG CGCGTCGGCG
AGCGCCGCCA GTGTGACGCG CGTCGGGCTG GTCCCTGGAT TTACGCTGAG TCCGGCAACC
GTTCCAACCC TCAACCTGCC GCCGGGCGCG ACGGCGGTCT TCACCCATAC GCTGACCAAC
ACCGGCAACG GGTCGGATAC GTTTGTGGTG ACGGCAACGT TGAGCAGCGG GCTGGAAAAC
CTGGTCGTTA CGCCGTCTGC TCCGTTCCTG CTGGCGCGCA ACGCATCGCA GCAGGTGGTG
GTGCAGGCGC GGGTGCGCGA TGGGCAGGCT GTCGGAGTGC AAACGATCCA GGTGACCGGT
GAGCGCGTCG GGGGCGGGGT AGCGTCGCAG ACGCAGACCG ACACGGTGAA TGTGCAGGCG
GCGCCGGGGG TGCGTCTCTC ACCCGGGCAG ACGCAGAATG TGACGCCGCC GGGAAGCGTG
ACCTTCACCC ACGTGCTGAC GAATGTCGGG AATGTCGCCG GCGGCTTCAG CGTCAGCGCG
GGTGGTTTGC CGGGCGGGTG GAGCATTGCC GGTCCGACGA ACCTGGTTCC GGCGAACTGT
CTGACGGGAC TCGCGCCCGG TGCGACGTGT CAGTTCGATC TGGTTGTCAC CACGCCGTCG
CAGTTGCCCC AGGTTCCGAC AGGACTGTAC CCGTTCCAGG TGCAGGCAAG CACAACCGGC
ACCTCGGACG CAGTGACCGA TGTGGCGAAT GTAACGGCAG TGCCGCAGTT CCTCTTCACC
GCAAATGAGA GCGGTAGCGG CGCGCCCGAC ACAGTGATCG GCTTCACCCA CCGGGTGACG
AACACCGGCA ATGTGACCGA CACCTACACC TTCAGCGTGC AGGTGAGCGG CGGCGGGTTC
AGCGCCTCGC CGCCGGGAAC GGTTGCCACC GTGCCGCCGG GATCAACGCG GCTTGTGACG
CTTGAAGTGC GCATCCCGCC GGCGGCGCCG GCCGGAACGA CCGGGGTCGT TACCCTCACG
GCGACGTCAG CGCAGGGTGC GCCGCCGCAG AGCGTCGTCG ATACGGTGAC CGTGAACGAA
GCCGACAATG CGCGCATCGA CGTGGTTGGT CTGGCGCAGC AGACCGTCTT CACCAGCGGC
GCACCGGCGA CTGCAATCTA TACCCTCAAT CTGTTCAACA CCGGCAATAC GACCATCAGT
TATACCCTGC GCCTGAATCC GGCAAGTCTG ACCGGCGGTT GGACGGCAAG CGTCACGCCG
ACGCTCACGG CGATCCTGAC GCCGGACGCA ACAACGCCGA CGCCATTGAC GGTGCAGGTG
AGCGTCCCGG CGGATGTGGT CGGGACGCAG AGCGTGACGG TCGAAGCGTT GCGTGGCGAC
GGTGCGGGTC CGGTGCTGGC ATCGGCAACG CTGACCACCA CGGCGCAGTT GATCGCAATC
GGCGACCTGT TGACGCCGGT CGAGCAGTGG GGCTTCGGGT TGCCCGGCGC AACGGTGGTC
TACACCCACA CGCTGCGCAA TGTGCGCCCG GTTGCCGATA CTTTTGTGTT CAGCGCGCTG
GCGCCGCTGG GGTACGAGGT GAGCCTGCCG CCGGCGACGT TCCTGCAACC CGGCGAGGAG
CGCGAGGTGA GCGTCAGCAT CCGCATTCCG ACCGGCGTGC TCTCCAACAC GATCGACGCC
ATGCGCCTGA GCGTCCAGTC GGTGTCGGAT CCCAACATCG CCGCCAGTGC GCGCGAGTAC
ACCACCATTC GCCAGGTAGT GAACGCGGTG ATCTCCCCGG CGTACACGCG CGTTGTTCAG
GCGGGCGACC AGGTGCGGTT GACCCATCAA CTGCTCAACA CCGGCAATGC GACCGACACA
TTCGTGTTGA CATATACCCA GACATTGAAC TGGAACATCG TTCTGCAACC GACGCAGCGC
ACACTGGGAC CGAATCAGCA GGCGCCGTTT ATAACGCTCG ATGTCAATGT GCCGACGAAC
GCGCCGCCGG GTTCGGTCAA CCGCATTCGG GTGCGGGCGC AATCGCAGAG CGATCCGACG
AAAGTGTTCG AGGTCGAGAA TCTGTTCGTC ATTCCGGCGG CGTTGCCGCA GGCGACGTAT
GATGTCTATC TGCCGCTGGT GCAGCGATGA
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| Protein sequence | MRCPLARAYR LLSVLALLAF FVVTPAPPVL AATFTVNSTG DDPDASPGNG VCQTAGGQCT
LRAAIQEVNA LTPGPHTIAF NIPTASSGYN SSGYWVIRLA SALPAITVGN VTIDGRTQPV
GNASWAHPRV VLDGSLITGG ANGLTIISSG NTIRRLTIQN FVANPFDFSD TTGSGIFIRD
STNNRVHGCY LGTTPDGTSA ARNHLAGVQI RNAGNNIIGN PTAGAGPDID TAGDNAFGNL
IAGNGRGTSG TSANVYLTAS TYDNGRGNVI RGNLIGTNLA GTAKIAGDTG NQRYGVLLYQ
YLDDTIIDAN VISGHDATSG SYGIYMYGLS VDGTDSPLDT VITGNVIGTT KGGISTTRVP
NRVGIYIAGA HNTRIGGVTL AERNIISGNG TTPPGGHGIH LRGRSVLNTT IQGNHIGLNA
NGASFGRSGT DSLGNLGHGI FVENNARQTT IRNNVIANNW GNGILLASDG AVVVGNRIGI
NTATPPISDD AFANGQASIW ISRGTTSSTS PGNRIGGTNP GDANIIAYGL GSTPVAVQIR
SDGTPNTSNN EVIGNFIGVA ATGQSLRASP SPSSIGVYII GNSSSLRADN NRIIGNTIGG
LGTGIQIEST FTTGNEISAN TIGLASAGNQ RGVWLFQTSG NTIGGAGGVG VNNTRNVLSY
NTLHGILVGV NANGNTLLRN LAHNNGGTSG GHGVFVDSTV SQVRISGTET RDNSGKGINR
AGSPPQPPTI SGITGGSPPT LQVQVPSGAN CGASGCRIEV FTSPTRDDAE GPRYLAFLDG
ASAGATVNVP VPDCDRFFSA TVTDQGGNTS EFNLTMFEAP FSCQTDFTLA QTGRSPPGTG
PVNPGTNVIY TYTVTNTGAS PITVNISRND TTGWASTPTP STLNLNAGAS ETFTISFAVP
ANALAGNYTF SVTAQVGATQ RTVNTTTSVA QVYGVAIAPT SQTATFARPQ VITFTHMITN
TGNGMDTITV TASVSPNDGA TVSVVGGNCV NLAAFSSCTR QIQLNIPVGP GSSLYTVTVT
ARSSGNPDVQ ATATDTASAG AAPQITPASQ LREALPGETV TFTHTVTNIG QSAGTFTPSL
TLSQGSPWSG ALTDPAPFNL NAGESRVVTM TVTVPNAPIP DAGTLVTATL TVLASGGASA
SAASVTRVGL VPGFTLSPAT VPTLNLPPGA TAVFTHTLTN TGNGSDTFVV TATLSSGLEN
LVVTPSAPFL LARNASQQVV VQARVRDGQA VGVQTIQVTG ERVGGGVASQ TQTDTVNVQA
APGVRLSPGQ TQNVTPPGSV TFTHVLTNVG NVAGGFSVSA GGLPGGWSIA GPTNLVPANC
LTGLAPGATC QFDLVVTTPS QLPQVPTGLY PFQVQASTTG TSDAVTDVAN VTAVPQFLFT
ANESGSGAPD TVIGFTHRVT NTGNVTDTYT FSVQVSGGGF SASPPGTVAT VPPGSTRLVT
LEVRIPPAAP AGTTGVVTLT ATSAQGAPPQ SVVDTVTVNE ADNARIDVVG LAQQTVFTSG
APATAIYTLN LFNTGNTTIS YTLRLNPASL TGGWTASVTP TLTAILTPDA TTPTPLTVQV
SVPADVVGTQ SVTVEALRGD GAGPVLASAT LTTTAQLIAI GDLLTPVEQW GFGLPGATVV
YTHTLRNVRP VADTFVFSAL APLGYEVSLP PATFLQPGEE REVSVSIRIP TGVLSNTIDA
MRLSVQSVSD PNIAASAREY TTIRQVVNAV ISPAYTRVVQ AGDQVRLTHQ LLNTGNATDT
FVLTYTQTLN WNIVLQPTQR TLGPNQQAPF ITLDVNVPTN APPGSVNRIR VRAQSQSDPT
KVFEVENLFV IPAALPQATY DVYLPLVQR
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