Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3242 |
Symbol | |
ID | 5210217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4079986 |
End bp | 4080669 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640596838 |
Product | glycosyl transferase family protein |
Protein accession | YP_001277553 |
Protein GI | 148657348 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.412321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCT CGGTCATTAT TCCGTGCTAC AACGAGTCGG CGACGCTGCG CGCCATTCTG GAGAAGGTGC GCGCCGTCGA TATCGATAAG GAAATCATTG CCGTTGACGA TCATTCCAGC GACGACACCT ATCGCATCCT GTGCGAAGAA GCCGCCCGCG ATCCATCGAT GACGGTCATT CGCCATCCAC GCAATCGGGG CAAGGGCGCT GCCGTTCGCA GCGGGCTGGC GCGCGCCCGC GGCGAGATCG TCATCGTCCA GGACGCCGAT CTGGAGTATG ACCCGAACGA CTACTACGAA CTGGTGGCGC CTATCGCTCA GGGGCGCGTC AATGTGGTCT TCGGTTCACG CTTCCTCGGT CGGCACACCG GTATGTACTT CTGGAATGCG CTCGGCAACA AAGGGTTGAC CTTCCTGACC AACTTTCTGT TCAACTGCTG GATCTCGGAC ATGGAGACCT GTTACAAAGC CATGCGCACC GAGATCATGC GCGATTTGAA ACTGGAGAGC AACGATTTCC GCATCGAGCC GGAGATCACC GCCAAGGTGC TGAAGCGCGG GCACCGCATC TATGAAGTGC CGGTCTCCTA TCTGGGACGC ACCTACGAGG AAGGCAAAAA AATGAAGCCC AGTCAGGGCT TCTACGCGAT TCTGGCGCTG CTGCGTTACC GGCTGTGGGA TTAG
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Protein sequence | MLLSVIIPCY NESATLRAIL EKVRAVDIDK EIIAVDDHSS DDTYRILCEE AARDPSMTVI RHPRNRGKGA AVRSGLARAR GEIVIVQDAD LEYDPNDYYE LVAPIAQGRV NVVFGSRFLG RHTGMYFWNA LGNKGLTFLT NFLFNCWISD METCYKAMRT EIMRDLKLES NDFRIEPEIT AKVLKRGHRI YEVPVSYLGR TYEEGKKMKP SQGFYAILAL LRYRLWD
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