Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3222 |
Symbol | rho |
ID | 5210197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4059452 |
End bp | 4060786 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596818 |
Product | transcription termination factor Rho |
Protein accession | YP_001277533 |
Protein GI | 148657328 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.584785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAGAA TGAGAACGAA AAATACCACC AACAATGGCG GCGAGCCGGT CGCCGAGTAC ACCGAACCCG TTCGCGACAA ACCGATCATC AATGTTGCCG AACTCGAGAG CAAAACGCTC AATGATCTGC GAGAACTGGC GAAAGCGAGC GGTATTACCG GCGTCAGCAA TCTGAAAAAG CAGGATCTGA TCTTCAAACT GCTGCAAGCG CAGACGGAAG AGGCGGGCCA TACCCTGTCC GACGGTGTTC TCGACATTGT CGCCGATGGG TATGGTTTCT TGCGCGGTGA ACGGATGTTG CCCGGACCAA ACGATGTCTA TGTGTCGCAA TCGCAGATTC GGCGGTTTGG GCTGCGCACT GGTGACCGGG TTTGGGGGCA GATCCGTCCG CCGAAGGAGA GTGAGCGGTA CTACTCGCTC CTGCGCGTCG AGTTGATCAA TGGGATGGAT CCGGAAACAG CGCGCAAACG CCCGTCGTTT GATCAGTTGA CGCCGATCTT TCCCAACGAA CAGATCAAAC TCGAAACGGA GCCGCACCTG CTGGCAACAC GTCTGGTTGA CCTGGTGGCG CCGATCGGTC GTGGTCAGCG CGGTCTGATC GTGTCGCCGC CCAAAGCAGG GAAGACGTTG CTGCTCAAGG CGATTGCCAA TGGCATCACC ACCAACTATC AGGACATTCA CCTGATGGTG CTGCTCATCG GTGAACGCCC CGAAGAAGTC ACCGATATGC GGCGCTCGGT CAAGGGCGAT GTCATCTCGT CAACGTTCGA TGAGCCGGTC GAAGACCATA CGAAGGTCGC CGAGATGACG CTGGAACGCG CCAAGCGACT GGTTGAAGGC GGGCAGGACG TTGTGATCCT CATGGACTCG ATCACCCGTC TGGCGCGTGC GTACAACCTG GATATGCCGC CGAGCGGGCG CACGCTCTCT GGCGGTATCG ATCCGGTGGC GCTCTACCCG CCCAAGCGCT TCTTCGGCGC TGCGCGCAAT ATCGAGAATG GCGGGTCACT GACGATCATC GCTACCTGTC TGGTCGATAC CGGCAGTCGA ATGGACGATG TGATCTATGA GGAGTTCAAA GGCACCGGGA ATATGGAACT GCACCTCGAC CGCAAACTGG CGGAGAAGCG TGTGTTCCCG GCAATCGACA TTACCCGCAG TGGTACGCGC CGTGAGGAAC TGTTGCTGCC GCCCGACGTG CTGCGTCAGG TGTGGACGCT GCGTCGTATG GTCAGCATGC TCGGCGAAGG CGAGGGTACT GAACTGGTCC TGACCCGCAT GATGAAGACG CGGAATAATG CCGAGTTCCT GGCGACGTTG AGCAAGGCGA ATTAG
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Protein sequence | MPRMRTKNTT NNGGEPVAEY TEPVRDKPII NVAELESKTL NDLRELAKAS GITGVSNLKK QDLIFKLLQA QTEEAGHTLS DGVLDIVADG YGFLRGERML PGPNDVYVSQ SQIRRFGLRT GDRVWGQIRP PKESERYYSL LRVELINGMD PETARKRPSF DQLTPIFPNE QIKLETEPHL LATRLVDLVA PIGRGQRGLI VSPPKAGKTL LLKAIANGIT TNYQDIHLMV LLIGERPEEV TDMRRSVKGD VISSTFDEPV EDHTKVAEMT LERAKRLVEG GQDVVILMDS ITRLARAYNL DMPPSGRTLS GGIDPVALYP PKRFFGAARN IENGGSLTII ATCLVDTGSR MDDVIYEEFK GTGNMELHLD RKLAEKRVFP AIDITRSGTR REELLLPPDV LRQVWTLRRM VSMLGEGEGT ELVLTRMMKT RNNAEFLATL SKAN
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