| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3214 |
|---|
| Symbol | |
|---|
| ID | 5210186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4052703 |
|---|
| End bp | 4053116 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596807 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001277525 |
|---|
| Protein GI | 148657320 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.18886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTG CGAAGGTCGC GCTGCCGTCT CCCTGCAACG CCCGGCAGTA TATTATACAC
GATTCCAGCC GCTATGCTAC AATATGCACC ATGGCTCGTG ACATCGTGCG TGTCGCCGCA
TACCACGACA TTCCGCCTGG TCGGATGATC TATGTCGAGA TCGATGGCCT GCCCATCGCA
CTGGCAAACG TCGCAGGCGT GATCTACGCT TTCAGCGATT CCTGCCGGCA CGAGGGCGGT
CCTCTCTCGT CCGGCGTCCT TATCGGCGAG ACGGTCACAT GCCCGTGGCA TGGATGGACC
TACAACGTCC GCACTGGTAA AGCGATCGTG CCGCCGGTTG GCATTCGCAT TCCAACCTAT
GAGACGCGCA TCGAAGGGAA CGATGTGTTT GTCGTCCTTG ACTGGCCCGA TTGA
|
|---|
| Protein sequence | MTVAKVALPS PCNARQYIIH DSSRYATICT MARDIVRVAA YHDIPPGRMI YVEIDGLPIA
LANVAGVIYA FSDSCRHEGG PLSSGVLIGE TVTCPWHGWT YNVRTGKAIV PPVGIRIPTY
ETRIEGNDVF VVLDWPD
|
|---|
| |