Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3119 |
Symbol | |
ID | 5210088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3918777 |
End bp | 3919685 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596711 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_001277432 |
Protein GI | 148657227 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000120301 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000160759 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCGATGA AGCACACCAT CCGCGAAGCC GTCACCAGCG CACACAACCC GCCAAAGGTC GGGCGTATTT TGCTCAACCC TTTTCGACGT GCGAAGCGTC GTGCTGGCGC TCCAACAACA TTTCGCGAAA AACTCTACTG GACGCTTGGC AACCTGCTTA TGCTGATCGG CGCCATCCTG CTGGCGTATG TTGGCGGCAT CTACGCCCAG GCGGATTACA ACCGCTACGC AGCGCGCGGC GACACCGACG CCCCGCCGCC TGCACCGGTC GCCGCACCGC GCGCCCCCGA CGCCGAGCCG ACGCCATTTG TCGCGCCGCT GCCGTTCGTC GCGCCGCGCC TCAACACCGC CGAAGGGCAA CTCATCAGCG ACGTGCCGGA CATCGTCAGG TCTATCGTTC CATCCCAGAT TTCGCGCATC ATCATTCCGA GCATCGACGT CGACTCAAAA GTCGTCGAAG TCGGCTGGGA AGTCGCAGAA CAGAACGGGC GACAGGTCGC CGTCTGGCAG GTCGCCGAGT ATGCTGTCGG GCACCATCGC GGCTCCGCCA ACCCCGGCGA AGGGAGCAAC ATCGTGCTTG CCGGTCATGT TGGCGGCTAC GGCAAAGTCT TCAAAGATCT GATCAACGTC AAAGAGGGTG ACCAGATCAT CCTGTTCGCT GGCGGTCAAC AGTATCTCTA CGTCGTGCGT GAACAGGTAA TGGTGCACGA GGAAGGCGTA TCACCCGAAC AGCAGGCGAT GAACGCCCTC TACATCGCGC CGACCAGCGA AGAGATGGTC ACGCTGATCA CCTGCTGGCC CGACCGCGGA CCGGAAAAAT TCAAGTATCG CATCATCGTG CGCGCAACCC CGTATGGCGC AGGAAACGAT GAGTCGCTCA CCAATACCGA AGGCTGGAAT GTGCGCTGA
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Protein sequence | MPMKHTIREA VTSAHNPPKV GRILLNPFRR AKRRAGAPTT FREKLYWTLG NLLMLIGAIL LAYVGGIYAQ ADYNRYAARG DTDAPPPAPV AAPRAPDAEP TPFVAPLPFV APRLNTAEGQ LISDVPDIVR SIVPSQISRI IIPSIDVDSK VVEVGWEVAE QNGRQVAVWQ VAEYAVGHHR GSANPGEGSN IVLAGHVGGY GKVFKDLINV KEGDQIILFA GGQQYLYVVR EQVMVHEEGV SPEQQAMNAL YIAPTSEEMV TLITCWPDRG PEKFKYRIIV RATPYGAGND ESLTNTEGWN VR
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