Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3105 |
Symbol | |
ID | 5210073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3898453 |
End bp | 3899706 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596696 |
Product | cobalamin synthesis protein, P47K |
Protein accession | YP_001277418 |
Protein GI | 148657213 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.934746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.32479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAGAG CGAGAAGTAC GAACGTGAAG CAACAGCATT CTTTTCGTCC CCTGCCGGTT ACCGTGCTGT CGGGGTTTCT TGGCAGCGGC AAGACGACGC TGCTCAACCA TGTGCTTGCC AATCGCTCAG GACTGCGGGT GGCGGTCATT GTCAACGATA TGAGCGAGAT CAATATCGAT GCGCAACTGG TGCGCAGCGG CGGTGCAGCG CTCAGCCGTA CCGATGAGCG TCTGGTCGAG ATGTCCAACG GATGCATCTG TTGCACGTTG CGTGAGGATC TGCTTGTCGA GGTGGCGCGT CTGGCGCGCG AGGGGCGCTT CGACTATCTT CTGATCGAGT CAACCGGCAT TTCCGAGCCG TTGCCCGTGG CTGAAACCTT CACCTTCGCC GATGAAACGG GGGTCAGTCT GGCGGAACTG GCGCGCCTGG ACACGATGGT GACGGTGGTT GACTCTTTCA ATTTCCCACG CGATTTTTTC TCGACCGATG ATCTGCGTGA TCGCAATCTG TCCGCTGGCG AGGAGGATGA GCGGTCGGTG GTTGATCTGC TGATCGATCA GGTGGAGTTC GCCGATGTGC TGGTGTTGAA CAAAGTCGAT CTGGTCGATC CAGACGCGGT TGATCACCTG GAGGCGCTGC TGCGCAAACT CAACCCCGAT GCGCGGATTG TGCGCACGAG TTTTGGGCGT GTGCCGTTGC ACGAGATTCT GAACACCGGA CGGTTCGATT TCGAACGTGC GGCGCAGGCG CCCGGCTGGC TCAAAGAATT GCGCGGCGAG CACACGCCGG AGACCGAGGA GTACGGTATT TCGAGTTTTG TCTACCGTGC GCGACGTCCA TTCCACCCGC AGCGCTTCTG GGACCTGATC CACGATGCGT GGCCCGGCGT GTTGCGCTCG AAAGGTCTGA TCTGGCTGGC GACGCGAATG CAGGTGAGCG GCATCTGGTC GCAGGCTGGA AATGCGTGTC GGGTTGAACC TGGCGGGATG TGGTGGGCGG CGTTGCTCGA GGACGAACTG CCCGATGACC CCGATGTAGA GGCGCAACTG GCGCAGGTGT GGCATAGCCG CTGGGGTGAT CGACGGCAGG AACTGGTGCT GATTGGTCAG GATATGGACG AAGCTGCGCT CCGTGCCCGC CTCGACGCAT GTTTGCTGAC CGATGCAGAA ATGGCGCTGG GACCGGAAGG TTGGGCGCAG TTTGAGGATC CGTTTGGTGT GTGGACGGTC TGGGAACTGG GATCTGGTGG TTAA
|
Protein sequence | MHRARSTNVK QQHSFRPLPV TVLSGFLGSG KTTLLNHVLA NRSGLRVAVI VNDMSEINID AQLVRSGGAA LSRTDERLVE MSNGCICCTL REDLLVEVAR LAREGRFDYL LIESTGISEP LPVAETFTFA DETGVSLAEL ARLDTMVTVV DSFNFPRDFF STDDLRDRNL SAGEEDERSV VDLLIDQVEF ADVLVLNKVD LVDPDAVDHL EALLRKLNPD ARIVRTSFGR VPLHEILNTG RFDFERAAQA PGWLKELRGE HTPETEEYGI SSFVYRARRP FHPQRFWDLI HDAWPGVLRS KGLIWLATRM QVSGIWSQAG NACRVEPGGM WWAALLEDEL PDDPDVEAQL AQVWHSRWGD RRQELVLIGQ DMDEAALRAR LDACLLTDAE MALGPEGWAQ FEDPFGVWTV WELGSGG
|
| |