Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3070 |
Symbol | |
ID | 5210038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3857361 |
End bp | 3858308 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596661 |
Product | periplasmic solute binding protein |
Protein accession | YP_001277383 |
Protein GI | 148657178 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000101463 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00347584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGGAAAC TGAAGACACG CGCCGCTATC TGGATCATAC TGGCGGCTGC CCTGCTCGTC GGATGCGCAC AACCCGCAAC CGGCAGCGAC GATCTGGCTG CCCATCCGAT CCGTGTTGTT GCGACGACGG GCATGGTTGG CGATCTGGTA CGCAATGTTG GCGGCGAGCG GGTCGAGGTC GTCACCCTGA TGGGACCGGG CGTCGATCCA CATCTCTACA AGGCAAGCGC CGATGATGTG GTGCAGTTGC AGCGGGCGGA TATCATCTTT TATAACGGTC TCCATCTCGA AGCGGCGATG AGCGAGGTAT TTGAACGGAT GCAGAGTCGG AGTCGAACAG TCGCAGTGAC TGGCGGCATC CCGCGTGAGG CGTTGCTTCC GTCAGACGAG TACGATAACC AGTTTGATCC CCATGTCTGG TTCGATGTCA TGCTATGGCG TCAGACCGTG GAGTATGTGC GCGATGTGTT GATCGATCTT GATCCGTCGC ATGCGTCGAT CTATCGAACA AATGCCGAAT CCTACGGGCG TCAGCTCGAT GAGTTGCACG CCTATGTGCA GAGTCGGGCG GCGCTTATTC CCGAGGATCA GCGCGTGCTG GTGACCGCAC ACGACGCATT CCGCTATTTT GGACGCGCCT ATGGGTTTGA GGTGCATGGA TTGCAGGGCA TCAGCACAGT GGTCGAGGCT GGCGCCGCCG ATGTTCAGCA GCTTGCCGAC TTTATTGCAA CCCGGCGCAT CCCTGCCATA TTCGTCGAGA CATCTGTGCC GCAACGGACG CTGGCGGCAG TGCAATCCGC AGTGCGTGCG CGCGGGTTTG AGGTGCGTAT CGGCGGGGAA CTTTTCTCCG ATGCTCTGGG CGATCCCGGT ACGCCAGAGG GGGAATACAT CGGTATGGTG CGACACAATA TCGATACTAT CGTTACATCG TTGCGAGGCG AAGGTTGA
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Protein sequence | MGKLKTRAAI WIILAAALLV GCAQPATGSD DLAAHPIRVV ATTGMVGDLV RNVGGERVEV VTLMGPGVDP HLYKASADDV VQLQRADIIF YNGLHLEAAM SEVFERMQSR SRTVAVTGGI PREALLPSDE YDNQFDPHVW FDVMLWRQTV EYVRDVLIDL DPSHASIYRT NAESYGRQLD ELHAYVQSRA ALIPEDQRVL VTAHDAFRYF GRAYGFEVHG LQGISTVVEA GAADVQQLAD FIATRRIPAI FVETSVPQRT LAAVQSAVRA RGFEVRIGGE LFSDALGDPG TPEGEYIGMV RHNIDTIVTS LRGEG
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