| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3061 |
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| Symbol | |
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| ID | 5210029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3844457 |
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| End bp | 3846571 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596653 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001277375 |
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| Protein GI | 148657170 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.352611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00632845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCTC ACTTCCTGCG CAGGTTCGCA CAACCGCCGC ACTTCGATGA TGAAGAGCAA
ACGCGCATCG CACGGACGCA GCATCTCCTG CTCGTCGTCT GTCTGACGAT TGCGCTGGTT
GCTTCCGGAG TCAATGCGTT ACTCCAGCGA CCCGTTCCAA CCGCTGCCCT CCTGGCATGC
AGCGGATTCT TGCTCATTTC CTTTCTGTTG CTCCACGCAC GTCGGGTGCG TCTGTCGATT
ATCGTCCTTT TGGGGACGAT CATCATGCTC ACTGCCTCAT TGCAGGTCAT CGGTCGCGGT
GCGCACGATA CGGTCACCAG TCTCTACGCC ACGATGATCG TCATCGGCAG CCTGCTCCTT
GACCGGCGGT CATTCATTGG ACTGGTTGCG GCGACGCTGC TGGTGATTGC GGGGGTTGTG
ACTGCCGAAG CGCGCGGATT AACCAGATCT CCCTATGAGG GCGATTTCGG CGACTGGTTC
GATCTTGCGC TCATTCTGGG GTTGACGGCG TTCACGTCAC GGTTGCTGAG CGAGAGTCTG
GAGCGCAGCC GCGCCCACGC CCGCGCCAAT GAACAGGCGC TGGCACAGCA GACGGAAGCG
TTGCGCCTCT CCGAGGAGCG CTATCGCATT CTGGCAGCCA ACCTGCCCGA TAGCGCCGTG
CTGATCTTCG ACCACGACCT GCGCTACGTG CTCGCCGATG GACCGGAACT CGCCGCAACC
GGGTATCTCA AGGAGAAGAT CGAGGGCCGC ACCCTGTGTG AGGTCGTTTC ATCCGCGTTT
GCGGAACAGG TTGAAGGCAA CCTCCGCGCT GTCTTGAGCG GCAGGTGCTT TTCGGCAGAA
TTGCCGTATG GTGATCGCAT CTACGCATAC TACTACATTC CGCTGGTCGA CGACCGTGGT
ATGGTAAAGT ATGCGATGGT CCTGGCGCGC AACGTGACTG CGCAGCGTCA GGCAGAGGCG
GATCTGCGGG CAAGCGAGGC GCAACTGCGC ATGCTCGCCG AGAATATGGG CGATGCGATT
GTGCAACTGG ATTCGCATCT CAATGTTGTG TATGTCAGCC CTTCGGTGCG GCGCGTTCTG
GGATGTGAGC CGGAAGATGT TGCAGGGAAA CAGATAGCGG CGCTTGTGTC CCCTGATGAT
GCGCCCGCTG TGATGGCAGC CATTGAAGAA GCGCGAGAGT CGGGCGCTGC TGCCATCCGG
GTTGAGTACC GTTTTCGTAA TCATCAGCAG ATGTGCATCT GGCTCGAAGC TGAAGTTCGT
CTGCTCTACG ATGCACACCA GCACTTTGAA GGCGCCATTC TCAGCATGCG CGATGTCACC
CGGCGCAAAG AGGTCGAGGC GGAACGGGAG CGCCTGATCG CCGAACTTGA GCAAAAGAAC
GCCGAACTTG AACGTTTCAC CTACACCGTA TCACACGACC TGAAAAGTCC TCTGATCACT
ATTCAGGGGT TCCTCGGCTA TCTGGAGCAG GACATTCGGA ACGGCGACAC GGACCGGGCG
TTGAGCGACA TCCGGCGTAT CAGCGCAGCG GCGCGCCGGA TGGAGCATTT GCTGCAAGAT
CTGCTGGAAC TGTCGCGCAT CGGGCGGGTC AGCGCTGAAC CGCAAACCGT ACCGTTCAAC
ATGATCGTAC AGGAAGCGCT TGAACTGATC GCCGGGAGAA TCGCAGAACG GCAGGCGCGG
ATCACGGTTG CGCCGGATAT GCCGCTCGTT CACGGCGATC GACGGCGTCT GGCGGAGGTG
GTGCAGAACC TGGTTGATAA CGCGATTAAG TTCTGCGATA ATCAGACTGT GCCAGAGATC
GAGATCGGTG TGCACGCCGT GGCAAGCAAC GAAGCAATCT TCTTTGTGCG TGACAATGGC
GTGGGCATCG ACCCAAGGTA CCACGATCAG ATCTTTGGTC TGTTCAACAA ACTCGATCCG
CAGAGTGAAG GAACAGGCGT CGGCTTAACG ATTGTGCGGC GGATCATCGA AGTGCATGGC
GGGCGTGTCT GGGTCGAGTC GGCTGGGCGG GGCGCTGGCG CAACCTTCTT TTTCTCGCTT
CCCACGATCC ATACACAGCA GCACGGAGTG AGTCATGACC GACAGCGCAT TCAGAGTATT
GCTGGTGGAA GATAA
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| Protein sequence | MTAHFLRRFA QPPHFDDEEQ TRIARTQHLL LVVCLTIALV ASGVNALLQR PVPTAALLAC
SGFLLISFLL LHARRVRLSI IVLLGTIIML TASLQVIGRG AHDTVTSLYA TMIVIGSLLL
DRRSFIGLVA ATLLVIAGVV TAEARGLTRS PYEGDFGDWF DLALILGLTA FTSRLLSESL
ERSRAHARAN EQALAQQTEA LRLSEERYRI LAANLPDSAV LIFDHDLRYV LADGPELAAT
GYLKEKIEGR TLCEVVSSAF AEQVEGNLRA VLSGRCFSAE LPYGDRIYAY YYIPLVDDRG
MVKYAMVLAR NVTAQRQAEA DLRASEAQLR MLAENMGDAI VQLDSHLNVV YVSPSVRRVL
GCEPEDVAGK QIAALVSPDD APAVMAAIEE ARESGAAAIR VEYRFRNHQQ MCIWLEAEVR
LLYDAHQHFE GAILSMRDVT RRKEVEAERE RLIAELEQKN AELERFTYTV SHDLKSPLIT
IQGFLGYLEQ DIRNGDTDRA LSDIRRISAA ARRMEHLLQD LLELSRIGRV SAEPQTVPFN
MIVQEALELI AGRIAERQAR ITVAPDMPLV HGDRRRLAEV VQNLVDNAIK FCDNQTVPEI
EIGVHAVASN EAIFFVRDNG VGIDPRYHDQ IFGLFNKLDP QSEGTGVGLT IVRRIIEVHG
GRVWVESAGR GAGATFFFSL PTIHTQQHGV SHDRQRIQSI AGGR
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