| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3026 |
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| Symbol | |
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| ID | 5209994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3806240 |
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| End bp | 3808699 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596618 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001277340 |
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| Protein GI | 148657135 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.956622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAA TTCTGATCAT CGACGACAGC AAGCAAATCT GTTCCCTGCT TGCTGACCAT
GTATTGCCGG AGCTGGGCTA TACTCCAACG ATTGCACATA CCGGGCGCCA GGGGCTGAAT
CGTCTCCGTC AGCGTACTCC TGATCTCATT CTCCTCGATC TGCAACTTCC GGACATCAGC
GGTCTCGACC TGTTGCGCCT GATTGCCCAG GAAGGGTACG ATGTGCCCGT TATCCTCATG
ACGGCGCATG GGTCGGAAGC GATTGCGGTC GAAGCGTTTC GTCTGGGAGC GCGGAACTAC
CTGATCAAGC CATTCAGTGA GACCGAGGCG CAGGCAGCAA TCGATCAGGC GCTGCGCGAA
CGGCGCCTCA GGCGCGAAAA AGAGCAACTC ACCCGCAACC TGCGGCAGCG CGTGCAGGAA
CTGACCGTCC TCTACTCGAT CGGCAAATCG GTCAGTTCTC TGCTCGATCT CGAAGAACTG
CTGGTGCGGA TCGTCGAAGC CGGCGTCTAT ATCACACGCG CCGAAGAGGG CTTTCTGCTG
CTGCGCGACC TGCACGCCAA CGAACTCTAC CTGCGTGCGG CGAAGAATCT TGGCGAGCAG
CGCGCCCAGA AGATGCGCAT GCCGATTGAC GACAGCCTGG CAGGGCAGGT GATCCGCACC
GGAAAGCCGA TCCGCCTGGA TAAAGCTGGC GCCGGCGCAC AGTTGAAAGT CATCACCGGA
TTCCTGGTGC GCGCGATCCT TCAGGTGCCG CTGATGGTCG GCAATCAGGT GATCGGTGTC
CTCGCGGTCG ATAATCAGCA ATCGGAACGC ACCTTCAGCG ACAATGATCA GTACCTGTTG
TCCGCGCTCG CCGATTATGC CGCCATCGCA ATCGAGAATG CACGCCTCTA TGAGCAGGTC
AAACAGAGCG AGGCGCGCTA CCGCGACCTG TTCGACAATG CCAACGACCT GATCTTCACC
CTCGACCGAC AGTTCAATCT GCGCAGTATC AACAAAGTCG CCCCGGCTAT CACCGGGTAT
GCCCAAAACG ACCTGATCGG TCGTCCGTTG CGCGAGGTGA GTTTCAGCGA CGCCTGGACC
TACGTGGAGC GCCTGTTCAA TGATGTGCTG CGGGGGCAGA CCGTTCCGCC GTTCGAGTTG
CAGATCCGAC GCCGTGATGA AGAGATCGCT GTACTCGAAG TCAGTGCGCG TTTGATCCGC
GATGGCGACG GTGCTGAAGC GATCCACTGC ATCGCCCGCG ACCTGACCGA GCGTCGCCGC
CTGGAAGAGC AACTCATCAA ATCGGAGAAA CTCTCCGCCA TTGGTCAACT GGTTGCCGGC
GTCGCGCACG AGGTCAATAA TCCGCTGACC AGTATCAGCG GCTACACCCA ACTGATGCTG
CGCGATGCCA GCCTGCCATC GGCGATCCGC GAAGACCTGC AACATATCAA CACCCAGGCG
GAGCGCGCAG CGCGCATCGT GCAGAACCTG TTGATGTTCG CCCGCGAACA CAAGCCGCAG
CGCATGCCCG TCGATATCAA CCAGGTGCTG CAAAGCACCC TTACCCTGCG CGCCTATCAA
CTGCGCGTCG ATAACATCAC GGTCGTCACC GATTTCGCTC CCGACCTGCC GCAAACGGTA
GCGGATCCGC ACCAGTTGCA GCAGGTCTTC CTCAACCTGA TCAACAATGC GCACCAGGCC
ATGATCGAGC GCGGCGGCAA GGGAACGCTC ACGCTGCGCA CCTCGGTTGA GCGGCGCGTT
GGCGAGGGCG GACGCGAGGA AACCTGCATC CGCGTCGCCG TGAACGACAC CGGCATCGGT
ATTCCGCCAC GCAACCTGAA TCGTATCTTC GACCCGTTCT TCACAACCAA GCCGATCGGG
CAGGGAACCG GATTAGGGTT GTCGATCTGC TTCGGCATCA TTCAGGAGCA TCACGGTCGC
ATCTGGGCGG AAAGCGAGGT TGGCGTCGGA ACGACAATGT ACGTTGAACT GCCGCTCGAC
CATGTTTATG AGCCACCGGG GATATCGTCC ATTGACTCAG AACCCGCATC TGTCGAAGCA
GAACCCCTTC CCGAAGAGTC GAACGGCGGC GCTGCGATCC TGGTGGTTGA CGACGAAGAG
GCGGTCAGCG CATTGCTGGC GCGACTGCTT ACCGATCTCG GTCATCGCCC GACCACAGTC
GCCAGCGGTG AGGCTGCGCT CGCTGCAATT GCGCGCCAAT CGTTCGACCT GATTCTGACC
GATATCAAAA TGCCTGGCAT GACCGGATTC GAACTGTACC AGCATATCAA GGAACACAAC
CCGCACCTGG CGCAGCGTAT CATTTTCATC ACCGGCGATA CAATCAGCGC CTCGACACAG
GCGCGCCTCG CGCAGACCGG AAGTCCCTAC ATCGCCAAAC CGTTTTCCAT TGAACGCCTT
GAAGCGCTGG TGAAGGCATG TCTTGCGCCC CAGGCAGCGG ATCATCTGCC CGCGCCCTGA
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| Protein sequence | MEEILIIDDS KQICSLLADH VLPELGYTPT IAHTGRQGLN RLRQRTPDLI LLDLQLPDIS
GLDLLRLIAQ EGYDVPVILM TAHGSEAIAV EAFRLGARNY LIKPFSETEA QAAIDQALRE
RRLRREKEQL TRNLRQRVQE LTVLYSIGKS VSSLLDLEEL LVRIVEAGVY ITRAEEGFLL
LRDLHANELY LRAAKNLGEQ RAQKMRMPID DSLAGQVIRT GKPIRLDKAG AGAQLKVITG
FLVRAILQVP LMVGNQVIGV LAVDNQQSER TFSDNDQYLL SALADYAAIA IENARLYEQV
KQSEARYRDL FDNANDLIFT LDRQFNLRSI NKVAPAITGY AQNDLIGRPL REVSFSDAWT
YVERLFNDVL RGQTVPPFEL QIRRRDEEIA VLEVSARLIR DGDGAEAIHC IARDLTERRR
LEEQLIKSEK LSAIGQLVAG VAHEVNNPLT SISGYTQLML RDASLPSAIR EDLQHINTQA
ERAARIVQNL LMFAREHKPQ RMPVDINQVL QSTLTLRAYQ LRVDNITVVT DFAPDLPQTV
ADPHQLQQVF LNLINNAHQA MIERGGKGTL TLRTSVERRV GEGGREETCI RVAVNDTGIG
IPPRNLNRIF DPFFTTKPIG QGTGLGLSIC FGIIQEHHGR IWAESEVGVG TTMYVELPLD
HVYEPPGISS IDSEPASVEA EPLPEESNGG AAILVVDDEE AVSALLARLL TDLGHRPTTV
ASGEAALAAI ARQSFDLILT DIKMPGMTGF ELYQHIKEHN PHLAQRIIFI TGDTISASTQ
ARLAQTGSPY IAKPFSIERL EALVKACLAP QAADHLPAP
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