| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3012 |
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| Symbol | |
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| ID | 5209980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3791391 |
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| End bp | 3792389 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596604 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001277326 |
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| Protein GI | 148657121 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0160933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCC TTTACATCCA GGAACAGGGC GTGATGGTGC GCAAACGTGA TAATCAGGTG
CTGATCACGA AAGACGGGCA GACGCTGAGC GAAGTGCCAC TGGCGAAGAT TGACCAGGTT
GTGCTGATGG GGCGGGGGGT GCAACTTTCG ACGGCGCTGC TGATCGATCT GCTTGAACGC
GGCATTCCGG TGACGTTCAC CAATCAGCAC GGCAGCCGCC ATTACGCCAC ACTGACTGCC
GGACCATCAC GCTTCGGCGA TCTGCGCATA CGCCAGATGC AGTTTGTCGG TGCACCGGAT
CGCGCCCTGC GCCTGGCAAA GGACATTGTG AGCGCCAAAC TGACCAATCA GCGTCGTTTG
CTGGCAGCGA CCGGGTGGCC AGCCGCAGCG ACGGCGATCG CGCAGATCGA TGCAGCGCTG
ACTGCGGCAG CAAACGCGCC GCATGTGGAC ATGCTGCGCG GGCATGAAGG CGCAGCGGCG
GCGGCATACT TCGGCGCGTG GCGCGCATCG CTTCCGCCGG TGTGGGGATT CGGCGGGCGT
GCCTTCTACC CGCCGCCCGA CCCGATCAAC GCCATGCTCT CATTCGGGTA TACGCTGGCG
CTCCATGATG TCATTACCGC TGTGCAGATC ACCGGTCTCG ATACGTACCT GGGCGTGTTT
CATGTGATCG AGCCTGGTCG TCCATCACTG GCGCTCGACC TGCTGGAGGA GTTTCGCCCG
TTGATCGTCG ACCGGTTGGT AATCGATCTG GTGCGTACCA ATGCGATTGG TCGCGAACAT
TTTCACCATC CGCAGGAACG ACCGGATGCC GTATACCTCG ATGATGTCGG GCGTACACTG
CTGGTGCAGC GGTATGAATC GATGCTTCAG ACAAAGGTAC GGTTGCCTGG CGGCGAGCAG
ACGCCGTTGC GACGGGTGAT CCTGCTGCAG GCGCAGGCGA TTGCGCGTAT CGTTCGCGGT
GAGCAGGAAC AGTACACAGG ATTCAGTCTG AATAACTGA
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| Protein sequence | MPTLYIQEQG VMVRKRDNQV LITKDGQTLS EVPLAKIDQV VLMGRGVQLS TALLIDLLER
GIPVTFTNQH GSRHYATLTA GPSRFGDLRI RQMQFVGAPD RALRLAKDIV SAKLTNQRRL
LAATGWPAAA TAIAQIDAAL TAAANAPHVD MLRGHEGAAA AAYFGAWRAS LPPVWGFGGR
AFYPPPDPIN AMLSFGYTLA LHDVITAVQI TGLDTYLGVF HVIEPGRPSL ALDLLEEFRP
LIVDRLVIDL VRTNAIGREH FHHPQERPDA VYLDDVGRTL LVQRYESMLQ TKVRLPGGEQ
TPLRRVILLQ AQAIARIVRG EQEQYTGFSL NN
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